GEO Browser - GEO

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27 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Genome binding/occupancy profiling by high throughput sequencing	Rattus norvegicus		NARROWPEAK
GSE116831	Deletion of Cdkn1b in ACI rats perturbs mammary progenitor cell proliferation and differentiation through non-cell-autonomous mechanisms	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Rattus norvegicus	52	NARROWPEAK TSV SRA Run Selector	Kornelia Polyak	Feb 11, 2019
GSE145965	Coordinated Regulation of Smooth Muscle Cell Remodeling by Non-coding and Coding products of Phenotype Switching Regulator Gene.	Genome binding/occupancy profiling by high throughput sequencing	Rattus norvegicus	7	BROADPEAK NARROWPEAK SRA Run Selector	Junyi Yu	Jan 01, 2021
GSE174235	Staphylococcus aureus modulate cellular metabolism to survive in epithelial cells	Genome binding/occupancy profiling by high throughput sequencing	Rattus norvegicus	2	BED NARROWPEAK TXT SRA Run Selector	Mengrui Wang	May 12, 2021
GSE126706	Glucocorticoid action in the hippocampus revealed by integrated genome-wide ChIP and RNA analysis	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Rattus norvegicus	73	NARROWPEAK	Johannes Reul	Jul 09, 2021
GSE126510	Glucocorticoid action in the hippocampus revealed by integrated genome-wide ChIP and RNA analysis [ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Rattus norvegicus	36	NARROWPEAK SRA Run Selector	Johannes Reul	Jul 10, 2021
GSE171923	Differential analysis of chromatin accessibility and gene expression profiles identifies cis-regulatory elements in rat adipose and muscle	Genome binding/occupancy profiling by high throughput sequencing	Rattus norvegicus	10	NARROWPEAK SRA Run Selector	Venugopalan Nair	Feb 07, 2022
GSE159815	The Regulatory Evolution of the Primate Fine-Motor System	Genome binding/occupancy profiling by high throughput sequencing	Macaca mulatta Mus musculus Rattus norvegicus	33	BIGWIG NARROWPEAK SRA Run Selector	Morgan Wirthlin	Mar 07, 2022
GSE214449	FOSL1 modulates Schwann cell responses in the wound microenvironment and regulates peripheral nerve regeneration	Genome binding/occupancy profiling by high throughput sequencing	Rattus norvegicus	2	BIGWIG NARROWPEAK	Qianqian Chen	Oct 02, 2022
GSE201624	Egr2 promoter antisense RNA as coordinator of chromatin remodeling and genome reorganization in Schwann cells [ATAC-seq]	Genome binding/occupancy profiling by high throughput sequencing	Rattus norvegicus	4	NARROWPEAK	Jorge Eduardo Fajardo	Apr 14, 2023
GSE201627	Egr2 promoter antisense RNA as coordinator of chromatin remodeling and genome reorganization in Schwann cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Rattus norvegicus	12	BED MATRIX NARROWPEAK	Jorge Eduardo Fajardo	Apr 14, 2023
GSE199260	Methamphetamine induced regional-specific transcriptomic and epigenetic changes in rat brain [ATAC-seq]	Genome binding/occupancy profiling by high throughput sequencing	Rattus norvegicus	29	BEDGRAPH NARROWPEAK TXT	Benpeng Miao	Jul 20, 2023
GSE199374	Methamphetamine induced regional-specific transcriptomic and epigenetic changes in rat brain	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Rattus norvegicus	61	BEDGRAPH NARROWPEAK TXT	Benpeng Miao	Jul 20, 2023
GSE211337	The transcription factor Stat-1 is essential for Schwann cell differentiation, myelination and myelin sheath regeneration [ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Rattus norvegicus	2	BIGWIG NARROWPEAK	Yun Gu	Sep 11, 2023
GSE244563	Role of ZHX2 in VSMCs [Chip-seq]	Genome binding/occupancy profiling by high throughput sequencing	Rattus norvegicus	2	NARROWPEAK	思源樊	Oct 07, 2023
GSE244565	Role of ZHX2 in VSMCs	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Rattus norvegicus	8	NARROWPEAK	思源樊	Oct 07, 2023
GSE245064	STAT1 deficiency underlies a proinflammatory imprint of naive CD4+ T cells in spondyloarthritis [ChIP-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Rattus norvegicus	18	BW NARROWPEAK	Frédéric Crémazy	Oct 11, 2023
GSE245067	STAT1 deficiency underlies a proinflammatory imprint of naive CD4+ T cells in spondyloarthritis	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Rattus norvegicus	44	BW NARROWPEAK	Frédéric Crémazy	Oct 11, 2023
GSE225371	Further inhibition of Histone H2A ubiquitination protects myocardium against ischemia/reperfusion injury through enhancing glycolysis and improving mitochondrial function via promoting Hsp27 expression	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Rattus norvegicus	14	BW NARROWPEAK	Long Pi Shi	Dec 27, 2023
GSE225538	Further inhibition of Histone H2A ubiquitination protects myocardium against ischemia/reperfusion injury through enhancing glycolysis and improving mitochondrial function via promoting Hsp27 expression [III]	Genome binding/occupancy profiling by high throughput sequencing	Rattus norvegicus	2	BW NARROWPEAK	Long Pi Shi	Dec 27, 2023
GSE241559	SRF transcriptionally regulates the oligodendrocyte cytoskeleton during CNS myelination (ChIP-Seq)	Genome binding/occupancy profiling by high throughput sequencing	Rattus norvegicus	16	BED BIGWIG NARROWPEAK TXT XLS	Fabian Michael Kern	Feb 23, 2024