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140 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Genome binding/occupancy profiling by high throughput sequencing	Mus musculus		TBI
GSE148979	An Integrated Epigenomic and Transcriptomic Map of Mouse and Human ab T Cell Development (Mouse scATACseq)	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	4	CSV H5 TBI TSV SRA Run Selector	Remy Bosselut	Nov 25, 2020
GSE149622	Skin-resident innate lymphoid cells converge on a pathogenic effector state	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	7	BED FA MTX TBI TSV SRA Run Selector	Elena Torlai Triglia	Dec 14, 2020
GSE151408	Erythrophagocytosis drives anti-inflammatory programming of liver macrophages (ATAC-seq)	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	2	CSV H5 RDS TBI TSV SRA Run Selector	Marc Pfefferle	Aug 13, 2020
GSE152607	Emergence of a high-plasticity cell state during lung cancer evolution	Genome binding/occupancy profiling by high throughput sequencing Other Expression profiling by high throughput sequencing	Mus musculus	7452	H5 TBI TSV	Matan Hofree	Jul 24, 2020
GSE153479	Single cell ATAC-seq of neonatal heart regeneration	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	4	BED CSV H5 MTX TBI TSV TXT SRA Run Selector	Zhaoning Wang	Dec 08, 2020
GSE154965	Emergence of a high-plasticity cell state during lung cancer evolution, single-cell ATACseq	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	2	H5 TBI TSV SRA Run Selector	Matan Hofree	Jul 24, 2020
GSE158196	Differential chromatin binding of the lung lineage transcription factor NKX2-1 resolves opposing murine alveolar cell fates in vivo [scATAC-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	1	BED BEDGRAPH BROADPEAK CLOUPE CSV H5 TBI TSV SRA Run Selector	Danielle R. Little	Mar 08, 2021
GSE158205	Differential chromatin binding of the lung lineage transcription factor NKX2-1 resolves opposing murine alveolar cell fates in vivo	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	78	BED BEDGRAPH BROADPEAK CLOUPE CSV H5 NARROWPEAK TBI TSV	Danielle R. Little	Mar 08, 2021
GSE161132	Decoding Cortical Glial Cell Development	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	2	CSV H5 MTX TBI TSV SRA Run Selector	Guoping Liu	Feb 05, 2021
GSE162662	Epigenetic traits inscribed in chromatin accessibility in aged hematopoietic stem cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	123	BW CSV H5 NARROWPEAK TBI TSV TXT	Atsushi Iwama	Dec 05, 2020
GSE180589	Single cell functional genomics reveals plasticity of subcutaneous white adipose tissue (WAT) during early postnatal development	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	32	CSV H5 MTX TBI TSV TXT SRA Run Selector	James G. Granneman	Sep 08, 2021
GSE181557	Kidney cell type specific changes in the chromatin and transcriptome landscapes following epithelial Hdac1 and Hdac2 knockdown	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	4	BED CSV H5 TBI TSV SRA Run Selector	Kelly Anne Hyndman	Dec 27, 2021
GSE183310	Decoding the PITX2 controlled genetic network in atrial fibrillation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	8	BED CSV H5 MTX TBI TSV TXT SRA Run Selector	Jeffrey D. Steimle	Apr 28, 2022
GSE184846	Dependence on Bcl6 and Blimp1 identifies distinct mechanisms driving memory and follicular helper CD4+ T cell differentiation [scATAC-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	8	CSV H5 TBI TSV SRA Run Selector	Remy Bosselut	Nov 14, 2021
GSE184848	Dependence on Bcl6 and Blimp1 identifies distinct mechanisms driving memory and follicular helper CD4+ T cell differentiation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	14	CSV H5 TBI TSV	Remy Bosselut	Nov 14, 2021
GSE186291	Single-cell ATAC of WT thymic IEL precursors (IELp)	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	2	CSV H5 TBI TSV SRA Run Selector	Jia Nie	Mar 30, 2022
GSE188669	Divergent clonal differentiation trajectories of T cell exhaustion (scATAC-seq)	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	11	TBI TSV SRA Run Selector	Ansuman T Satpathy	Jul 25, 2022
GSE188670	Divergent clonal differentiation trajectories of T cell exhaustion	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	57	CSV TBI TSV	Ansuman T Satpathy	Jul 25, 2022
GSE189210	Parallel single cell multi-omics analysis of neonatal skin reveals transitional fibroblast states that restrict differentiation into distinct fates	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	2	BED CSV H5 MTX TBI TSV SRA Run Selector	Sean Thompson	Nov 24, 2021
GSE190054	FoxP3 associates with enhancer-promoter loops to regulate Treg-specific gene expression [ATAC-seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	1	BED MTX TBI TSV TXT SRA Run Selector	CBDM Lab	Dec 07, 2021