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140 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Genome binding/occupancy profiling by high throughput sequencing	Mus musculus		TBI
GSE142366	Dynamic transcriptional responses to injury of regenerative and non-regenerative cardiomyocytes revealed by single-nucleus RNA sequencing	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus Rattus norvegicus	18	BED CSV H5 MTX TBI TSV	Zhaoning Wang	Mar 18, 2020
GSE148981	An Integrated Epigenomic and Transcriptomic Map of Mouse and Human ab T Cell Development	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	78	BW CSV H5 TAB TBI TSV TXT	Remy Bosselut	Nov 25, 2020
GSE149622	Skin-resident innate lymphoid cells converge on a pathogenic effector state	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	7	BED FA MTX TBI TSV SRA Run Selector	Elena Torlai Triglia	Dec 14, 2020
GSE152607	Emergence of a high-plasticity cell state during lung cancer evolution	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	7452	H5 TBI TSV	Matan Hofree	Jul 24, 2020
GSE158205	Differential chromatin binding of the lung lineage transcription factor NKX2-1 resolves opposing murine alveolar cell fates in vivo	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	78	BED BEDGRAPH BROADPEAK CLOUPE CSV H5 NARROWPEAK TBI TSV	Danielle R. Little	Mar 08, 2021
GSE161132	Decoding Cortical Glial Cell Development	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	2	CSV H5 MTX TBI TSV SRA Run Selector	Guoping Liu	Feb 05, 2021
GSE162662	Epigenetic traits inscribed in chromatin accessibility in aged hematopoietic stem cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	123	BW CSV H5 NARROWPEAK TBI TSV TXT	Atsushi Iwama	Dec 05, 2020
GSE162798	Simple oligonucleotide-based multiplexing of single-cell chromatin accessibility	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	15	BED CSV MTX TBI TSV TXT SRA Run Selector	Anil K Sood	Oct 20, 2021
GSE169431	Transcriptional Activation of Regenerative Haematopoiesis via Niche Sensing	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus Mus musculus	42	H5 NARROWPEAK TBI TSV	Tomer Itkin	Apr 01, 2024
GSE179043	Transcriptional programs dictating Schwann cell transformation in MPNST	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	50	CSV H5 TAR TBI TSV TXT	Lai Man (Natalie) Wu	Nov 07, 2022
GSE180589	Single cell functional genomics reveals plasticity of subcutaneous white adipose tissue (WAT) during early postnatal development	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	32	CSV H5 MTX TBI TSV TXT SRA Run Selector	James G. Granneman	Sep 08, 2021
GSE183310	Decoding the PITX2 controlled genetic network in atrial fibrillation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	8	BED CSV H5 MTX TBI TSV TXT SRA Run Selector	Jeffrey D. Steimle	Apr 28, 2022
GSE184848	Dependence on Bcl6 and Blimp1 identifies distinct mechanisms driving memory and follicular helper CD4+ T cell differentiation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	14	CSV H5 TBI TSV	Remy Bosselut	Nov 14, 2021
GSE188670	Divergent clonal differentiation trajectories of T cell exhaustion	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	57	CSV TBI TSV	Ansuman T Satpathy	Jul 25, 2022
GSE189210	Parallel single cell multi-omics analysis of neonatal skin reveals transitional fibroblast states that restrict differentiation into distinct fates	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	2	BED CSV H5 MTX TBI TSV SRA Run Selector	Sean Thompson	Nov 24, 2021
GSE190795	IL-9 is required for multi-cytokine producing tissue-resident memory CD4+ T cell-dependent allergic airway recall responses	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	14	CSV H5 TBI TSV SRA Run Selector	Rakshin Kharwadkar	Jan 31, 2022
GSE192597	Single nuclei RNA sequencing of skin draining lymph nodes in the setting of skin inflammation and RAG1 fate mapping	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	4	H5 TBI TSV	Aaron Ver Heul	Apr 28, 2024
GSE193238	A primed immune transcriptional programme is activated in oligodendroglia in multiple sclerosis [ATAC-Seq and RNA-Seq]	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	4	BEDPE H5 RDS TBI TSV WIG	Eneritz Agirre	Jan 28, 2022
GSE198730	Transcriptomics, Regulatory Syntax, and Enhancer Identification in Heterogenous Populations of Mesoderm-Induced ESCs at Single-Cell Resolution	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	39	BED CSV H5 HIC MTX TBI TSV XLSX	Vittorio Sartorelli	Jul 31, 2022
GSE198905	Single-cell profiling of mouse cardio-pharyngeal development under maternal diabetes mellitus	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	12	TBI TSV	Tomohiro Nishino	Oct 16, 2023