GEO Browser - GEO

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1248 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Genome binding/occupancy profiling by high throughput sequencing	Mus musculus		NARROWPEAK
GSE205783	Sequential and directional insulation by conserved CTCF sites underlies the Hox timer in stembryos	Other Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	170	BEDGRAPH BIGWIG COOL NARROWPEAK TXT	Lucille Lopez-Delisle	Apr 28, 2023
GSE230234	Pre-Hypertrophic Chondrogenic Enhancer Landscape of Limb and Axial Skeleton Development [ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	4	BW NARROWPEAK	Guillaume Andrey	May 11, 2023
GSE244758	The Transcription factor NF-YA is Crucial for Neural Progenitor Maintenance during Brain Development	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	3	BEDGRAPH NARROWPEAK	Tomoyuki Yamanaka	Jan 11, 2024
GSE296541	2-hydroxyglutarate mediates whitening of brown adipocytes coupled to nuclear softening upon mitochondrial dysfunction	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	15	NARROWPEAK	Aleksandra Trifunovic	May 14, 2025
GSE137771	3D chromosome structure reveals unique signatures involved in mouse female germline stem cells and their development	Other Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	11	NARROWPEAK TXT SRA Run Selector	Ji Wu	Jan 20, 2022
GSE214264	3D genome structures of single differentiating mouse ES cells reveal a unique reorganisation of chromatin in the formative state	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	101	BROADPEAK BW CSV NARROWPEAK NCC TSV TXT	David Lando	Jan 19, 2024
GSE158870	923 enhancer deletion newborn mouse	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	28	NARROWPEAK TXT	Cristina de Guzman Strong	Oct 30, 2020
GSE269169	A CRISPR/Cas9 screen in embryonic stem cells reveals that Mdm2 regulates totipotency exit [CUT&Tag]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	3	BIGWIG BW NARROWPEAK	Qingxiang Gao	Jul 01, 2024
GSE175850	A Characterization of the Chromatin Landscape and the Glucocorticoid Receptor Cistrome in Mouse Cerebral Cortical Embryonic Neural Stem and Progenitor Cells	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	13	BW NARROWPEAK SRA Run Selector	Donald B. DeFranco	May 25, 2022
GSE133417	A Congenital Anemia Dissociates the Pleiotropic Functions of Master Transcription Factor GATA1	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	60	BW MTX NARROWPEAK TSV	Caleb Lareau	Dec 31, 2021
GSE133409	A Congenital Anemia Dissociates the Pleiotropic Functions of Master Transcription Factor GATA1 [G1E_ChIPseq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	9	BED BW NARROWPEAK TSV SRA Run Selector	Caleb Lareau	Dec 31, 2021
GSE246370	A SIRT7-dependent acetylation switch regulates early B-cell differentiation and lineage commitment through Pax5	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	36	BW NARROWPEAK TXT	Alejandro Vaquero	Sep 19, 2024
GSE200062	A SOX2 engineered epigenetic silencer factor represses the glioblastoma genetic program	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Homo sapiens Mus musculus	41	BED NARROWPEAK TSV	Luca Massimino	Aug 10, 2022
GSE219110	A SOX9-B7x axis safeguards dedifferentiated tumor cells from immune surveillance to drive breast cancer progression	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	16	BW MTX NARROWPEAK TSV TXT	Wenjun Guo	Oct 16, 2023
GSE290328	A Study of Allostery Within Liganded RARα:RXR Heterodimers at the Genome Scale [CUT&Run]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	14	NARROWPEAK	Conner Hawkins	Feb 24, 2025
GSE101717	A TAD boundary at the HoxD locus segregates opposing limb regulatory landscapes and their target genes	Other Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	91	BEDGRAPH MATRIX NARROWPEAK TAR TXT	Eddie Rodríguez-Carballo	Dec 22, 2017
GSE101714	A TAD boundary at the HoxD locus segregates opposing limb regulatory landscapes and their target genes [ChIP-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	13	BEDGRAPH NARROWPEAK SRA Run Selector	Eddie Rodríguez-Carballo	Dec 22, 2017
GSE167487	A Variant in Human AIOLOS Impairs Adaptive Immunity by Interfering with IKAROS	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	26	BEDGRAPH NARROWPEAK TXT SRA Run Selector	Motoi Yamashita	May 01, 2021
GSE115047	A chromatin integration labeling method enables lower-input epigenomic profiling	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	189	BED BW CSV NARROWPEAK SRA Run Selector	Yasuyuki Ohkawa	Oct 09, 2018
GSE49847	A comparative encyclopedia of DNA elements in the mouse genome	Expression profiling by high throughput sequencing Genome variation profiling by genome tiling array Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	588	BAM BEDRNAELEMENTS BIGWIG BROADPEAK NARROWPEAK PAIR	ENCODE DCC	Aug 14, 2013