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2375 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Genome binding/occupancy profiling by high throughput sequencing	Mus musculus		BIGWIG
GSE205783	Sequential and directional insulation by conserved CTCF sites underlies the Hox timer in stembryos	Other Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	170	BEDGRAPH BIGWIG COOL NARROWPEAK TXT	Lucille Lopez-Delisle	Apr 28, 2023
GSE269169	A CRISPR/Cas9 screen in embryonic stem cells reveals that Mdm2 regulates totipotency exit [CUT&Tag]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	3	BIGWIG BW NARROWPEAK	Qingxiang Gao	Jul 01, 2024
GSE124197	A Genome-wide CRISPR-Based Screen Identifies KAT7 as a Senescence Driver	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	71	BED BIGWIG TXT SRA Run Selector	Yuxuan Zheng	Oct 09, 2020
GSE109690	A Nucleosome Destabilizing Factor that Facilitates Transcription in Chromatin	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	28	BED BIGWIG BW TXT SRA Run Selector	Jia Fei	Apr 16, 2018
GSE151901	A Polycomb domain found in committed cells impairs differentiation when introduced into PRC1 in pluripotent cells	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	161	BIGWIG	Robert Kingston	Oct 11, 2021
GSE151899	A Polycomb domain found in committed cells impairs differentiation when introduced into PRC1 in pluripotent cells (ChIP-seq, CUT&RUN datasets)	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	71	BIGWIG TXT SRA Run Selector	Robert Kingston	Oct 11, 2021
GSE231898	A SCAN-box containing KRAB-ZFP maintains DNA methylation and inhibits gene expression	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	20	BEDGRAPH BIGWIG	Bo Yang	May 01, 2025
GSE231892	A SCAN-box containing KRAB-ZFP maintains DNA methylation and inhibits gene expression [ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	2	BIGWIG	Bo Yang	May 01, 2025
GSE104309	A TFIID-SAGA perturbation that targets MYB and suppresses acute myeloid leukemia	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	36	BIGWIG	Yali XU	Jan 08, 2018
GSE104307	A TFIID-SAGA perturbation that targets MYB and suppresses acute myeloid leukemia (ChIP-seq)	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	9	BIGWIG SRA Run Selector	Yali XU	Jan 08, 2018
GSE155882	A Transcriptional Switch Governs Fibroblast Activation in Heart Disease	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Other	Mus musculus	56	BED BIGWIG BW CSV MTX TSV WIG SRA Run Selector	Pawel Przytycki	Apr 08, 2021
GSE144876	A balanced Oct4 protein interaction network is crucial for maintaining pluripotency	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	24	BIGWIG SRA Run Selector	Dong Han	Dec 10, 2021
GSE254090	A cell type-aware framework for nominating non-coding variants in Mendelian regulatory disorders	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	87	BIGWIG BW RESULTS TAR	Elizabeth C Engle	Aug 06, 2024
GSE49847	A comparative encyclopedia of DNA elements in the mouse genome	Expression profiling by high throughput sequencing Genome variation profiling by genome tiling array Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	588	BAM BEDRNAELEMENTS BIGWIG BROADPEAK NARROWPEAK PAIR	ENCODE DCC	Aug 14, 2013
GSE97761	A context-specific cardiac Beta-catenin and GATA4 interaction influences TCF7L2 occupancy and remodels chromatin driving disease progression in the adult heart [ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	13	BIGWIG SRA Run Selector	Laura C Zelarayan	Jan 23, 2018
GSE159648	A coregulator shift, rather than the canonical switch, underlies thyroid hormone action in liver	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	53	BIGWIG TSV TXT SRA Run Selector	Mitchell Lazar	Jan 01, 2021
GSE125972	A distal super enhancer mediates estrogen-dependent mouse uterine–specific gene transcription of Insulin-like growth factor 1 (Igf1)	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	38	BIGWIG HIC TXT SRA Run Selector	Sylvia C Hewitt	May 08, 2019
GSE29184	A draft map of cis-regulatory sequences in the mouse genome	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Genome variation profiling by high throughput sequencing	Mus musculus	143	BAM BIGWIG BOWTIE TXT	Bing Ren	Jul 01, 2012
GSE29218	A draft map of cis-regulatory sequences in the mouse genome [ChIP-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	122	BAM BIGWIG BOWTIE TXT SRA Run Selector	Bing Ren	Jul 01, 2012
GSE33821	A functional map of DNA-associated proteolysis	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	12	BIGWIG SRA Run Selector	Andre Catic	Dec 01, 2013