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1197 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Genome binding/occupancy profiling by high throughput sequencing	Mus musculus		BEDGRAPH
GSE21671	Diverse Targets of the Transcription Factor STAT3 Contribute to T Cell Pathogenicity and Homeostasis	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	19	BED BEDGRAPH CEL	Golnaz Vahedi	May 30, 2010
GSE22105	Discrete Roles of STAT4 and STAT6 Transcription Factors in Tuning Epigenetic Modifications and Transcription during Helper T Cell Differentiation	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	21	BED BEDGRAPH CEL TXT	Golnaz Vahedi	Jun 18, 2010
GSE25274	The transcriptional coactivator Cbp regulates self-renewal and differentiation in adult hematopoietic stem cells	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	6	BED BEDGRAPH	Wai-In Chan	Dec 15, 2011
GSE25689	Cell Type-Specific DNA Methylation at Intragenic CpG Islands in the Immune System	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	28	BEDGRAPH	Adrian Bird	May 23, 2011
GSE26553	Opposing regulation of the Il17 locus through direct, reciprocal actions of STAT3 and STAT5	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	6	BED BEDGRAPH CEL	Golnaz Vahedi	Feb 09, 2011
GSE27060	A Bcl6-Smrt/Ncor repression program controls atherosclerosis	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	10	BEDGRAPH TXT	Ruth T Yu	Mar 30, 2012
GSE28332	The Demethylase JMJD2C/KDM4C Localizes to H3K4me3 Positive Transcription Start Sites	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	30	BEDGRAPH CEL	Marianne Terndrup Pedersen	Jan 09, 2014
GSE34020	Integral roles for Rev-erb alpha and Rev-erb beta in the circadian clock function	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	27	BEDGRAPH TXT	Ruth T Yu	Mar 29, 2012
GSE34908	Genetic and epigenetic determinants of neurogenesis and myogenesis	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	33	BAM BEDGRAPH CEL MAP	Stephen Tapscott	Mar 26, 2012
GSE35790	Kinetic RNA polymerase II occupancy, associated histone marks, and mRNA accumulation reveal transcriptional and post-transcriptional mechanisms underlying circadian gene expression	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	35	BEDGRAPH CEL	Nouria Hernandez	Dec 06, 2012
GSE36386	ZNF335 regulates stem cell proliferation and neuronal differentiation via Trithorax complex and REST/NRSF	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	15	BEDGRAPH CEL EXP	Christopher A Walsh	Dec 31, 2012
GSE38825	IRF8-induced monocyte differentiation	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	12	BEDGRAPH TXT	Tomohiko Tamura	Jan 24, 2013
GSE40540	IP of 5-hydroxymethylcytosine (5-hmC) and 5-methylcytosine (5-mC) enriched DNA fragments from control and PB treated mouse livers	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by genome tiling array	Mus musculus	153	BEDGRAPH CEL PAIR	John Paterson Thomson	Sep 12, 2012
GSE41091	H2A.Z inheritance during the cell cycle	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	24	BED BEDGRAPH CEL	Rohan Williams	Nov 23, 2012
GSE41955	The RUNX2 Cistrome in Osteoblasts: Characterization, Downregulation Following Differentiation and Relationship to Gene Expression	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	22	BED BEDGRAPH CALLS PAIR	Mark B Meyer	Apr 24, 2014
GSE43103	H4K16 acetylation marks active genes and enhancers of embryonic stem cells, but does not alter chromatin compaction	Expression profiling by array Genome binding/occupancy profiling by genome tiling array Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	33	BEDGRAPH PAIR TXT WIG	Gillian Taylor	Aug 23, 2013
GSE44278	Redistribution of H3K27me3 upon DNA hypomethylation results in de-repression of polycomb-target genes	Expression profiling by array Expression profiling by high throughput sequencing Genome binding/occupancy profiling by genome tiling array Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	35	BEDGRAPH PAIR	James P Reddington	Feb 12, 2013
GSE44756	Hedgehog Molecular Networks in the Second Heart Field	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	17	BEDGRAPH TXT	Xinan "Holly" Yang	Mar 01, 2013
GSE45733	Integrative genomic analysis of CREB defines a critical role for transcription factor networks in mediating the fed/fasted switch in liver	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	16	BEDGRAPH TXT	Logan J Everett	May 01, 2013
GSE46124	ER, GR, and E2	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	51	BEDGRAPH CEL CHP CSV	Songjoon Baek	Jul 01, 2013