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4115 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Genome binding/occupancy profiling by high throughput sequencing	Mus musculus		BED
GSE254377	Ldb1 establishes multi-enhancer networks to regulate gene expression [ChIP-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	65	BED BW	Nicholas Aboreden	Nov 27, 2024
GSE20898	Genome-wide Analyses of Transcription Factor GATA3-Mediated Gene Regulation in Distinct T Cell Types	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	53	BED BEDGRAPH RPKM SRA Run Selector	Brian J Abraham	Aug 26, 2011
GSE151011	Mechanistic dissection of dominant AIRE mutations in mouse models reveals evidence for AIRE auto-regulation [ATAC-seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	12	BED BROADPEAK SRA Run Selector	Jakub Abramson	Sep 01, 2021
GSE151013	Mechanistic dissection of dominant AIRE mutations in mouse models reveals evidence for AIRE auto-regulation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	102	BED BROADPEAK NARROWPEAK	Jakub Abramson	Aug 30, 2021
GSE218881	Nanowell-based single-cell combinatorial indexed ATAC-seq	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	3	ARROW BED SRA Run Selector	Andrew Adey	Feb 08, 2023
GSE101546	SETDB1 controls T helper cell lineage integrity by repressing endogenous retroviruses	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	40	BED BROADPEAK TXT SRA Run Selector	Veronique Adoue	Feb 05, 2019
GSE141825	Single-cell ATAC-seq of mouse thymus iNKT cells	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	5	BED CSV H5 MTX TBI TSV SRA Run Selector	Indra Adrianto	Jun 27, 2023
GSE130384	Cdk5-mediated phosphorylation ensures robust neuronal differentiation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	24	BED BW XLSX SRA Run Selector	Swarnaseetha Adusumalli	Nov 29, 2019
GSE61432	Phospho-HLXB9 binding sites in mouse insulinoma cells	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	2	BED SRA Run Selector	Sunita Agarwal	Sep 30, 2015
GSE99798	Meg3 binding sites in mouse insulinoma cells	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	6	BED SRA Run Selector	Sunita K Agarwal	Sep 20, 2017
GSE229439	Tracing functional (epi)genomic imprints and their evolutionary origins in human defense antiviral cellular response (ChIP-Seq)	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	85	BED BIGWIG XLSX	Marios Agelopoulos	Feb 24, 2025
GSE229445	Tracing functional (epi)genomic imprints and their evolutionary origins in human defense antiviral cellular response	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	156	BED BIGWIG	Marios Agelopoulos	Feb 24, 2025
GSE288595	Tracing functional (epi)genomic imprints and their evolutionary origins in human defense antiviral cellular response (ChIP-seq III)	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	14	BED BIGWIG XLSX	Marios Agelopoulos	Feb 24, 2025
GSE115929	PAD2-mediated citrullination contributes to efficient oligodendrocyte differentiation and myelination	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	8	BED BEDGRAPH SRA Run Selector	Eneritz Agirre	Apr 23, 2019
GSE154175	A primed immune transcriptional program is activated in oligodendroglia in multiple sclerosis [SCATAC_10X]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	7	BED CSV H5 RDS TSV WIG SRA Run Selector	Eneritz Agirre	May 21, 2021
GSE165444	ZFP281 ChIP-sequencing of MMTV-Neu early lesion (EL) and primary tumor (PT) spheres	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	8	BED SRA Run Selector	Julio Aguirre-Ghiso	Jan 26, 2021
GSE186584	Epigenetic dysregulation from chromosomal transit in micronuclei [4T1 MN ATAC-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	6	BED BW SRA Run Selector	Albert S Agustinus	Mar 13, 2023
GSE186589	Epigenetic dysregulation from chromosomal transit in micronuclei	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	187	BED BIGWIG BW TDF TXT	Albert S Agustinus	Mar 13, 2023
GSE214448	Epigenetic dysregulation from chromosomal transit in micronuclei [ATAC-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	6	BED BW TDF	Albert S Agustinus	Mar 13, 2023
GSE225615	Single-cell multiomic analysis identifies macrophage subpopulations in promoting cardiac repair	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	48	BED BW	fu Ai	Sep 06, 2024