GEO Browser - GEO

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70 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL24247	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus		TAR
GSE270915	The expression order determines the pioneer functions of Ngn3 and NeuroD1 in pancreatic endocrine differentiation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	3745	BEDGRAPH CSV MTX TAR TBI TSV	Cheng-ran Xu	Feb 15, 2025
GSE268567	Single-cell parallel analysis of DNA damage and transcriptome reveals selective genome vulnerability	Expression profiling by high throughput sequencing Other Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	30	BW TAR TSV	Dongsheng Bai	Jan 03, 2025
GSE263333	Spatial-Mux-seq: Multiplexed spatial mapping of chromatin features, transcriptome, and proteins at tissue scale	Expression profiling by high throughput sequencing Other Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	12	TAR TSV	Liran Mao	Oct 22, 2024
GSE242067	Genome access is transcription factor specific and defined by nucleosome position	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	131	BW TAR TXT	Dirk Schuebeler	Aug 13, 2024
GSE271760	Structural perturbation of chromatin domains with multiple developmental regulators can severely impact gene regulation and development	Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	88	TAR	Pedro P Rocha	Aug 06, 2024
GSE253954	Conserved dorsal horn neuron subtype-specific enhancers are implicated in the genetic risk of chronic pain.	Other Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Macaca mulatta Mus musculus	17	RDS TAR	Michael Leone	Aug 01, 2024
GSE247511	Cadherins modulate the self-organizing potential of gastruloids	Expression profiling by high throughput sequencing Third-party reanalysis Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	83	BW LOOM NARROWPEAK TAR	ALEXANDRE MAYRAN	Jul 18, 2024
GSE272483	CTCF-dependent insulation of Hoxb13 and the heterochronic control of tail length	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other Third-party reanalysis	Mus musculus	54	BW NARROWPEAK TAR	Lucille Lopez-Delisle	Jul 18, 2024
GSE266423	Single-cell transcriptome profiles of wild-type and IRF8KO microglia	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	8	H5 TAR TBI TSV	Keita Saeki	Jul 01, 2024
GSE266424	IRF8 defines the epigenetic landscape in postnatal microglia, thereby directing their transcriptome programs - additional datasets	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	39	H5 NARROWPEAK TAB TAR TBI TSV	Keita Saeki	Jul 01, 2024
GSE223164	Osr2 functions as a biomechanical checkpoint to aggravate CD8+ T cell exhaustion in tumor	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	49	BW TAR	Dawang Zhou	May 14, 2024
GSE259284	Deciphering cell states and genealogies of human hematopoiesis with single-cell multi-omics [Crispr_Mouse_Batch1]	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	4	H5 TAR TSV TXT	Chen Weng	Feb 26, 2024
GSE259285	Deciphering cell states and genealogies of human hematopoiesis with single-cell multi-omics [Crispr_Mouse_Batch2]	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	4	H5 TAR TSV	Chen Weng	Feb 26, 2024
GSE244536	Deterministic reprogramming of neutrophils in tumors	Genome binding/occupancy profiling by high throughput sequencing Other Expression profiling by high throughput sequencing	Mus musculus	35	MTX TAR TSV TXT	Melissa Ng	Jan 11, 2024
GSE219015	Deciphering cell states and genealogies of human hematopoiesis with single-cell multi-omics	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	56	H5 RDS TAR TSV TXT	Chen Weng	Nov 18, 2023
GSE190286	Aged intestinal stem cells propagate cell-intrinsic sources of inflammaging in mice	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	86	TAR	Erica Valentini	Oct 26, 2023
GSE238149	Ikaros is a principal regulator of Aire+ mTEC homeostasis, thymic mimetic cell diversity, and central tolerance [Ikaros scATAC-seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	2	TAR	Jun Hyung Sin	Oct 25, 2023
GSE238150	Ikaros is a principal regulator of Aire+ mTEC homeostasis, thymic mimetic cell diversity, and central tolerance	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	15	TAR	Jun Hyung Sin	Oct 25, 2023
GSE218274	PAX3-FOXO1 expression in endothelial progenitors dictates myogenic reprogramming and rhabdomyosarcoma identity	Genome binding/occupancy profiling by high throughput sequencing Other Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	75	BED BW HIC TAR TDF TXT	Hongjian Jin	Sep 29, 2023
GSE224894	Polycomb Repressive Complex 2 regulates basal cell fate during adult olfactory neurogenesis	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	13	BED BIGWIG BW TAR	Bradley Goldstein	Sep 18, 2023