GEO Browser - GEO

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257 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL24247	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus		MTX
GSE87064	The Dynamic Epigenetic Landscape of the Retina During Development, Reprogramming, and Tumorigenesis	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Homo sapiens Mus musculus	868	BED BW MTX TSV TXT	Beisi Xu	May 03, 2017
GSE128671	Replicational dilution of H3K27me3 in mammalian cells and the role of poised promoters	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	47	BW MTX TSV TXT SRA Run Selector	Ramesh Shivdasani	Jan 17, 2020
GSE144693	Beta cell-specific CD8+ T cells maintain stem-cell memory-associated epigenetic programs during type 1 diabetes	Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	39	BED MTX TSV	yiping fan	Apr 07, 2020
GSE146235	Heterogeneity of alveolar macrophages infected by Cryptococcus neoformans	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	24	BW MTX TSV	Mari L Shinohara	Jun 08, 2020
GSE150995	scRNA and snATAC sequencing of cells harvested from the tendon injury site after a severe burn/tenotomy injury	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	9	MTX TSV SRA Run Selector	Amanda Katherine Huber	Jun 30, 2020
GSE128762	Neonatal hematopoietic stem and progenitor cell ontogeny at single cell resolution	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	169	MTX TSV	Jeffery Magee	Aug 20, 2020
GSE143293	Histone 1 deficiency drives lymphomagenesis through disruption of 3D chromatin architecture	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	53	HIC MTX TSV TXT SRA Run Selector	Matt Teater	Sep 02, 2020
GSE158873	Single-cell omics analysis reveals functional diversification of hepatocytes during liver regeneration [scATAC-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	4	BED MTX TSV SRA Run Selector	Anna Mae Diehl	Oct 02, 2020
GSE158874	Single-cell omics analysis reveals functional diversification of hepatocytes during liver regeneration	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	20	BED MTX NARROWPEAK TSV TXT	Anna Mae Diehl	Oct 02, 2020
GSE158474	Genetically defined syngeneic mouse models of ovarian cancer as tools for the discovery of combination immunotherapy	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	26	MTX TSV VCF	Sonia Iyer	Nov 17, 2020
GSE164044	Nucleome Dynamics during Retinal Development [scRNA-seq/scATAC-seq_Mm]	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	5	BED MTX TSV SRA Run Selector	Michael A Dyer	Dec 31, 2020
GSE165158	Establishment of intestinal organoid cultures modeling injuryassociated epithelial regeneration	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	86	BW MTX TSV	Yulin Lyu	Jan 20, 2021
GSE155928	Transcriptome and chromatin accessiblity analysis of mice soft palate to unreveal the role of Runx2 in regulating palate muscle development.	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	12	BEDGRAPH MTX TSV TXT SRA Run Selector	Xia Han	Jan 27, 2021
GSE161132	Decoding Cortical Glial Cell Development	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	2	CSV H5 MTX TBI TSV SRA Run Selector	Guoping Liu	Feb 05, 2021
GSE157398	Mapping the regulatory landscape of auditory hair cells from single cell multi-omics data	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	4	BED MTX TSV SRA Run Selector	Joerg Waldhaus	Mar 11, 2021
GSE155882	A Transcriptional Switch Governs Fibroblast Activation in Heart Disease	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Other	Mus musculus	56	BED BIGWIG BW CSV MTX TSV WIG SRA Run Selector	Pawel Przytycki	Apr 08, 2021
GSE155692	ASCL1 represses a latent osteogenic program in small cell lung cancer in multiple cells of origin	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	15	BW MTX TSV	Trudy Oliver	May 22, 2021
GSE117529	RNA/WES/ATAC/scRNA sequencing of murine melanoma primary and LN metastases	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	58	BW MTX TSV TXT SRA Run Selector	Nathan Edward Reticker-Flynn	Jun 14, 2021
GSE181421	Chromatin accessibility underlies cell-type specific programs of amphetamine-regulated gene expression in Nucleus Accumbens interneurons	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	128	BW CSV MTX TSV	David Gallegos	Aug 06, 2021
GSE165114	Multiomic sequencing of the MGE	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	2	CSV MTX TSV SRA Run Selector	Kathryn Allaway	Sep 22, 2021