GEO Browser - GEO

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3213 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL24247	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus
GSE217745	Aberrant accumulation of Kras-dependent pervasive transcripts during tumor progression renders cancer cells dependent on PAF1 expression	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	20	BW	Xiangzheng Liu	Nov 01, 2023
GSE242201	DNA methylation shapes the Polycomb landscape during the exit from naive pluripotency	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	39	BW	Julien Richard Albert	Jul 16, 2024
GSE202319	Mechanotransduction mediated by cyclical respiratory motion maintains lung alveolar epithelial cell fate	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	11	H5	Michael Patrick Morley	May 01, 2024
GSE243020	The loss of an orphan nuclear receptor NR2E3 augments Wnt/β-Catenin signaling via epigenetic dysregulation that promotes the Sp1-β catenin-p300 interactions in hepatocellular carcinoma.	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	8	TXT	Kyounghyun Kim	Aug 26, 2024
GSE164906	"Stripe" transcription factors provide accessibility to co-binding partners in mammalian genomes.	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Third-party reanalysis Genome variation profiling by high throughput sequencing	Mus musculus	476	BW TAB VCF	Yongbing Zhao	Jul 21, 2022
GSE214264	3D genome structures of single differentiating mouse ES cells reveal a unique reorganisation of chromatin in the formative state	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	101	BROADPEAK BW CSV NARROWPEAK NCC TSV TXT	David Lando	Jan 19, 2024
GSE183764	9sCa: MSL2 is an allelic dosage sensor in mammals	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other Methylation profiling by high throughput sequencing	Mus musculus	244	BED BEDPE BW RDATA RDS TSV TXT SRA Run Selector	Asifa Akhtar	Aug 10, 2023
GSE269169	A CRISPR/Cas9 screen in embryonic stem cells reveals that Mdm2 regulates totipotency exit [CUT&Tag]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	3	BIGWIG BW NARROWPEAK	Qingxiang Gao	Jul 01, 2024
GSE225554	A Cellular Atlas of the Down Syndrome Brain Identifies Accelerated Oligodendrocyte Precursor Cell Senescence	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	12	H5 MTX TBI TSV	Brian Kalish	Sep 14, 2023
GSE213020	A Cre-deleter specific for embryo-derived brain macrophages reveals distinct features of microglia and border macrophages	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	25	H5 TSV	Julia Belk	Feb 02, 2023
GSE212002	A Critical Role of RUNX1 in Governing Megakaryocyte-Primed Hematopoietic Stem Cell Differentiation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	120	BW MTX TSV TXT	Chen Wang	Jan 20, 2023
GSE212001	A Critical Role of RUNX1 in Governing Megakaryocyte-Primed Hematopoietic Stem Cell Differentiation [CUT&RUN Chip-seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	16	BW TXT	Chen Wang	Jan 20, 2023
GSE256183	A DGCR8/FLII-dominated on-off switch for immediate-early genes governs embryo implantation in mouse and human [Cut&Tag]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	72	BW	Xuehui Lv	Jul 08, 2024
GSE253593	A Lactate-induced SREBF2-dependent genetic program drives an immunotolerant dendritic cell population during cancer progression	Expression profiling by high throughput sequencing Other Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	15	JPG MTX TSV	Brent Hanks	May 13, 2024
GSE253589	A Lactate-induced SREBF2-dependent genetic program drives an immunotolerant dendritic cell population during cancer progression [scATAC-seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	2	BED MTX TSV	Brent Hanks	May 13, 2024
GSE260639	A MOZ-TIF2 leukemic mouse model displays KAT6 inhibitor-sensitive H3K23 propionylation and dysregulation of a set of highly active developmental genes [ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	12	BW	Mitzi I Kuroda	Jul 03, 2024
GSE260640	A MOZ-TIF2 leukemic mouse model displays KAT6 inhibitor-sensitive H3K23 propionylation and dysregulation of a set of highly active developmental genes [Cut&Run]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	8	BW	Mitzi I Kuroda	Jul 03, 2024
GSE213880	A MTA2-SATB2 chromatin complex restrains colonic plasticity toward small intestine by retaining HNF4A at colonic chromatin	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	40	BED BW	Wei Gu	Mar 07, 2024
GSE173943	A MYT1L Syndrome mouse model recapitulates patient phenotypes and reveals altered brain development due to disrupted neuronal maturation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	57		Joseph Dougherty	Sep 22, 2021
GSE173588	A MYT1L Syndrome mouse model recapitulates patient phenotypes and reveals altered brain development due to disrupted neuronal maturation [ATAC-Seq]	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	29	CSV SRA Run Selector	Joseph Dougherty	Sep 22, 2021