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2972 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL19057	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus
GSE204952	Skin basal cell carcinomas assemble a pro-tumorigenic spatially organized and self-propagating Trem2+ myeloid niche	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	11	ZIP TSV TBI BW	Anthony Oro	Mar 28, 2023
GSE198447	The Genomic Architecture of Pregnancy-Associated Plasticity in the Maternal Mouse Hippocampus	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	2	YAML XLSX TSV H5	Brian Kalish	Aug 01, 2022
GSE73372	AP-1 family members act at DNA targets in conjunction with Sox9 to promote chondrocyte hypertrophy	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	6	XLSX BED SRA Run Selector	Xinjun He	Feb 29, 2016
GSE83422	Methyl-seq and ChIP-seq analyses of TSPAN8-high and TSPAN8-low subpopulations of ID4-EGFP+ undifferentiated spermatogonia	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	10	XLSX TXT SRA Run Selector	Brian P. Hermann	Apr 24, 2017
GSE90533	An HDAC3-PROX1 Corepressor Module Acts on HNF4α to Control Hepatic Triglycerides	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	34	XLSX BIGWIG BED SRA Run Selector	Manashree Damle	Jul 26, 2017
GSE94351	Mutations in linker-2 of KLF1 impair expression of membrane transporters and cytoskeletal proteins causing hemolysis	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	13	XLSX DIFF CSV SRA Run Selector	Stephen Huang	Jul 03, 2024
GSE102643	Identification of the coiled-coil domain as an essential element of MBD3 for preserving lineage commitment potential of ESCs	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	5	XLSX SRA Run Selector	Akihiko Okuda	Jun 25, 2019
GSE104702	Transcriptional regulation mediated by H2A.Z via ANP32e-dependent inhibition of protein phosphatase 2A	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	5	XLSX BW SRA Run Selector	Danish Sayed	May 22, 2018
GSE104891	Regulation of mesenchymal stem to transit amplifying cell transition in the continuously growing mouse incisor [Histone ChIP]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	2	XLSX TXT BED SRA Run Selector	Paul T. Sharpe	Mar 12, 2019
GSE104892	Regulation of mesenchymal stem to transit amplifying cell transition in the continuously growing mouse incisor [Ring1b ChIP]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	2	XLSX TXT BED SRA Run Selector	Paul T. Sharpe	Mar 12, 2019
GSE107651	Unsupervised clustering and epigenetic classification of single cells	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	96	XLSX SRA Run Selector	Mahdi Zamanighomi	Apr 20, 2018
GSE108356	Epigenetic regulation of brain region-specific microglia clearance activity	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	97	XLSX TXT SRA Run Selector	Pinar Ayata	Jul 13, 2018
GSE108917	LncRNAs and open chromatin regions constitute midbrain dopaminergic neuron- specific molecular signatures	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Mus musculus	11	XLSX BROADPEAK SRA Run Selector	Philippe Ravassard	Jan 09, 2019
GSE110209	Spatiotemporal pattern of the transcriptional regulatory landscape of the mouse ventricle after myocardial infarction	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	36	XLSX BED SRA Run Selector	Vincent M. Christoffels	Jul 22, 2019
GSE111888	Different neuronal activity patterns induce different gene expression programs [ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	52	XLSX BW SRA Run Selector	Kelsey Tyssowski	Mar 16, 2018
GSE112128	Function of BRG1 in colitis and colitis-associated-cancer	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	8	XLSX TXT BW	Yongfeng Liu	Mar 01, 2019
GSE112199	High-resolution, in vivo genome binding interactions of the mouse and human constitutive androstane receptors in rodent liver reveal species differences and novel cancer-related target genes	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	14	XLSX BW BED SRA Run Selector	Curtis J. Omiecinski	Oct 08, 2018
GSE113671	NELFA is a novel regulator of the 2C-like state	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	35	XLSX NARROWPEAK BW SRA Run Selector	Zhenhua hu	Nov 18, 2019
GSE114196	Loss of H3K9me3 heterochromatin at protein coding genes enables developmental lineage specification (ChIP-Seq)	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	48	XLSX BW SRA Run Selector	dario nicetto	Oct 31, 2018
GSE115294	Genome-wide mapping of Yap1 in the normal and hypertrophied hearts	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	3	XLSX BW SRA Run Selector	Maha Abdellatif	Jun 05, 2018