GEO Browser - GEO

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167 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL19057	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus		CSV
GSE93431	Two independent modes of chromosome organization are revealed by cohesin removal	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	32	BW CSV HDF5 NARROWPEAK TSV TXT SRA Run Selector	Nezar Abdennur	Jun 10, 2017
GSE92426	MAP3K4 Kinase Activity Controls Chromatin Remodelers for Transitions Between Epithelial and Mesenchymal Phenotypes in Trophoblast Stem Cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	7	CSV WIG	Amy Abell	Mar 07, 2017
GSE164849	Spatially mapped single-cell chromatin accessibility	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	5	CSV TXT SRA Run Selector	Andrew Adey	Jan 15, 2021
GSE166179	A primed immune transcriptional program is activated in oligodendroglia in multiple sclerosis	Genome binding/occupancy profiling by high throughput sequencing Other Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	1185	CSV H5 SF WIG	Eneritz Agirre	May 21, 2021
GSE107154	Decoding the regulatory circuit by epigenetic regulator MOF in haematopoiesis	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	68	BED BIGWIG CSV TXT	Asifa Akhtar	Mar 13, 2020
GSE165114	Multiomic sequencing of the MGE	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	2	CSV MTX TSV SRA Run Selector	Kathryn Allaway	Sep 22, 2021
GSE165233	Genetic and epigenetic coordination of cortical interneuron development	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	27	BED BW CSV MTX TSV	Kathryn Allaway	Sep 22, 2021
GSE72084	Characterization of chromatin and gene expression changes during fasting in mouse liver [ChIP-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	38	BEDGRAPH CSV SRA Run Selector	Songjoon Baek	Dec 20, 2016
GSE72087	Characterization of chromatin and gene expression changes during fasting in mouse liver	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	50	BEDGRAPH CSV FPKM_TRACKING	Songjoon Baek	Dec 20, 2016
GSE144014	RNA-seq and ChIP-seq studies identify multiple pathways relevant for T cell-mediated tumor immunity regulated by SOX4.	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	23	BED BW CSV	Archis Bagati	Jan 01, 2021
GSE164935	Genetic control of pluripotency epigenome informs differentiation bias in mouse embryonic stem cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	180	CSV MTX TSV SRA Run Selector	Christopher Baker	Oct 05, 2021
GSE145268	p63 Maintains the Proliferative Potential of Salivary Gland Stem/Progenitor Cells by Regulating Follistatin, a Key Mediator of TGF-b/Activin Signaling	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	12	CSV	Jonathan E Bard	Sep 23, 2020
GSE225372	Distinct disease mutations in DNMT3A result in a spectrum of behavioral, epigenetic, and transcriptional disruptions	Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	100	BED CSV XLSX	Diana Christian Beard	Nov 08, 2023
GSE155100	Arid1a is essential in cardiomyocytes for neonatal heart maturation [ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	8	BEDGRAPH CSV SRA Run Selector	Cornelis J. Boogerd	Jul 06, 2023
GSE148979	An Integrated Epigenomic and Transcriptomic Map of Mouse and Human ab T Cell Development (Mouse scATACseq)	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	4	CSV H5 TBI TSV SRA Run Selector	Remy Bosselut	Nov 25, 2020
GSE148981	An Integrated Epigenomic and Transcriptomic Map of Mouse and Human ab T Cell Development	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	78	BW CSV H5 TAB TBI TSV TXT	Remy Bosselut	Nov 25, 2020
GSE199739	NuRD complex recruitment to Thpok mediates CD4+ T cell lineage differentiation	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	4	BAI CSV H5 TBI TSV	Remy Bosselut	Jun 10, 2022
GSE241159	Interspecies comparison reveals Hmga1 as driver of cardiac regeneration	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Danio rerio Mus musculus	42	BW CSV TSV	Mara Bouwman	Nov 15, 2024
GSE227889	Transcription Factor Co-Expression Mediates Lineage Priming for Embryonic and Extra-Embryonic Differentiation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	54	BED BW CSV TXT	Josh M Brickman	Dec 05, 2023
GSE166674	A comprehensive transcriptome signature of murine hematopoietic stem cell aging	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	4	BROADPEAK CSV NARROWPEAK SRA Run Selector	Leonid Bystrykh	Apr 02, 2021