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512 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Genome binding/occupancy profiling by high throughput sequencing			TDF
GSE40629	Differential transcript isoform usage pre- and post-zygotic genome activation in zebrafish	Genome binding/occupancy profiling by high throughput sequencing	Danio rerio	2	TDF SRA Run Selector	Håvard Aanes	Nov 01, 2012
GSE151544	Characterization of chromatin and gene expression changes during fasting and refeeding in mouse liver [ChIP-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	8	TDF SRA Run Selector	Domenico Accili	May 24, 2022
GSE151546	Characterization of chromatin and gene expression changes during fasting and refeeding in mouse liver	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	32	TDF TXT	Domenico Accili	May 24, 2022
GSE60215	A streamline experimental and computational approach for inexpensive, accurate, efficient and high-throughput annotation of 5’ and 3’ ends	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster	54	BED TDF TXT WIG SRA Run Selector	Shaked Afik	Feb 13, 2017
GSE186589	Epigenetic dysregulation from chromosomal transit in micronuclei	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	187	BED BIGWIG BW TDF TXT	Albert S Agustinus	Mar 13, 2023
GSE214448	Epigenetic dysregulation from chromosomal transit in micronuclei [ATAC-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	6	BED BW TDF	Albert S Agustinus	Mar 13, 2023
GSE62697	ChIP-seq for IRF7	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	4	TDF SRA Run Selector	Ido Amit	Dec 03, 2014
GSE62702	A negative feedback loop of transcription factors specifies alternative dendritic cell chromatin states (ChIP-Seq)	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	18	TDF SRA Run Selector	Ido Amit	Dec 11, 2014
GSE62703	A negative feedback loop of transcription factors specifies alternative dendritic cell chromatin states (ATAC-Seq)	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	2	TDF SRA Run Selector	Ido Amit	Dec 14, 2014
GSE75914	Genome-wide characterization of MED12 occupancy in human CD34+ cells	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	3	BED TDF SRA Run Selector	Beatriz Aranda-Orgilles	Aug 25, 2016
GSE76055	Regulation of enhancer dynamics by MED12	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	48	BW CEL TDF WIG	Beatriz Aranda-Orgilles	Aug 25, 2016
GSE147653	Genome-wide maps of HHEX binding	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	3	TDF SRA Run Selector	Shuhei Asada	Jun 09, 2020
GSE147656	Role of HHEX in hematopoietic cells	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens	15	TDF TXT	Shuhei Asada	Jun 09, 2020
GSE160602	Epigenetic inactivation of ERF reactivates γ-globin expression in β-thalassemia [ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	4	TDF SRA Run Selector	Xiuqin Bao	Dec 27, 2020
GSE160603	Epigenetic inactivation of ERF reactivates γ-globin expression in β-thalassemia	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	9	TDF	Xiuqin Bao	Dec 27, 2020
GSE262797	A one-base therapeutic insertion in the HBG2 distal promoter reactivates γ-globin expression [ChIP-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	10	TDF	Xiuqin Bao	Apr 02, 2025
GSE97827	RNA pol II Dynamics Modulate Co-transcriptional Chromatin Modification, CTD phosphorylation and transcriptional direction	Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Saccharomyces cerevisiae	53	BW TDF SRA Run Selector	David L. Bentley	May 24, 2017
GSE100040	Human TFIIH kinase CDK7 regulates transcription-associated epigenetic modification	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	34	BW TDF SRA Run Selector	David L. Bentley	Aug 01, 2017
GSE96928	H3K27me3 deposition over sarcomeric and cytoskeletal promoters is required for cardiomyocyte cytokinesis and wound invasion during zebrafish heart regeneration [ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Danio rerio	13	CSV TDF SRA Run Selector	Raz Ben-Yair	Sep 17, 2019
GSE96930	H3K27me3-mediated silencing of structural genes is required for zebrafish heart regeneration	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Danio rerio	19	TDF	Raz Ben-Yair	Sep 17, 2019