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15455 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Genome binding/occupancy profiling by high throughput sequencing			SRA Run Selector
GSE60200	Quantitative modeling of transcription factor binding specificities using DNA shape	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	1	TXT SRA Run Selector	Namiko Abe	Mar 01, 2015
GSE92394	MAP3K4 Kinase Activity Controls Chromatin Remodelers for Transitions Between Epithelial and Mesenchymal Phenotypes in Trophoblast Stem Cells [ChIP-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	4	TXT WIG SRA Run Selector	Amy Abell	Mar 07, 2017
GSE161236	The histone acetyltransferase HBO1 (KAT7) promotes efficient tip cell sprouting during angiogenesis	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	7	TXT SRA Run Selector	Waruni Abeysekera	Sep 30, 2021
GSE185820	The histone lysine acetyltransferase HBO1 regulates hematopoietic stem cell quiescence and self-renewal	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	5	TXT SRA Run Selector	Waruni Abeysekera	Oct 13, 2021
GSE20898	Genome-wide Analyses of Transcription Factor GATA3-Mediated Gene Regulation in Distinct T Cell Types	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	53	BED BEDGRAPH RPKM SRA Run Selector	Brian J Abraham	Aug 26, 2011
GSE39538	Mapping Epigenomic Type-Specific Differences Occurring During Hematopoiesis [ChIP-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	13	BED TXT SRA Run Selector	Brian J Abraham	Mar 25, 2013
GSE159613	EP300 selectively controls the enhancer landscape of MYCN-amplified neuroblastoma [ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	6	WIG SRA Run Selector	Brian J Abraham	Nov 09, 2021
GSE159614	EP300 selectively controls the enhancer landscape of MYCN-amplified neuroblastoma [ChIP-rx]	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	9	WIG SRA Run Selector	Brian J Abraham	Nov 09, 2021
GSE183475	EP300 selectively controls the enhancer landscape of MYCN-amplified neuroblastoma [CUT&RUN]	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	8	WIG SRA Run Selector	Brian J Abraham	Nov 09, 2021
GSE148672	Genome-wide maps of chromatin state of IRF5+/+ and IRF5-/- CD4+ mouse T cells	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	15	BW TXT SRA Run Selector	Clara Abraham	Jun 29, 2020
GSE90048	Chromatin immunoprecipitation and ATAC-Seq data from meduallar thymic epithelial cells [ATAC-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	6	BIGWIG SRA Run Selector	Jakub Abramson	Dec 12, 2016
GSE90049	Chromatin immunoprecipitation and ATAC-Seq data from meduallar thymic epithelial cells [ChIP-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	2	BIGWIG SRA Run Selector	Jakub Abramson	Dec 12, 2016
GSE151011	Mechanistic dissection of dominant AIRE mutations in mouse models reveals evidence for AIRE auto-regulation [ATAC-seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	12	BED BROADPEAK SRA Run Selector	Jakub Abramson	Sep 01, 2021
GSE165550	Mechanistic dissection of dominant AIRE mutations in mouse models reveals AIRE auto-regulation [ChIP-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	16	NARROWPEAK SRA Run Selector	Jakub Abramson	Sep 01, 2021
GSE151544	Characterization of chromatin and gene expression changes during fasting and refeeding in mouse liver [ChIP-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	8	TDF SRA Run Selector	Domenico Accili	May 24, 2022
GSE169558	In vivo dissection of a clustered-CTCF domain boundary reveals developmental principles of regulatory insulation [ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	11	BW SRA Run Selector	Rafael Domínguez Acemel	May 05, 2022
GSE73783	Three-dimensional disorganisation of the cancer genome occurs coincident with long range genetic and epigenetic alterations [ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	3	BED SRA Run Selector	Joanna Achinger-Kawecka	Apr 04, 2016
GSE118711	Epigenetic reprogramming at estrogen-receptor binding sites alters the 3D chromatin landscape in endocrine resistant breast cancer [ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	14	BB SRA Run Selector	Joanna Achinger-Kawecka	Dec 11, 2019
GSE171070	Epigenetic therapy suppresses tumour growth by rewiring ER-mediated long-range chromatin interactions in ER+ endocrine-resistant breast cancer [ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	23	NARROWPEAK SRA Run Selector	Joanna Achinger-Kawecka	Dec 12, 2021
GSE61316	Pioneer factors govern super-enhancer dynamics in stem cell plasticity and lineage choice	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	10	WIG SRA Run Selector	Rene Christian Adam	Mar 19, 2015