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15441 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Genome binding/occupancy profiling by high throughput sequencing			SRA Run Selector
GSE218881	Nanowell-based single-cell combinatorial indexed ATAC-seq	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	3	ARROW BED SRA Run Selector	Andrew Adey	Feb 08, 2023
GSE33838	DUX4 activates germline genes, retroelements and immune-mediators: Implications for facioscapulohumeral dystrophy	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	2	BAI BAM BEDGRAPH CSV SRA Run Selector	Stephen Tapscott	Jan 03, 2012
GSE65191	Nucleosome locations in human oral keratinocytes	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	4	BAI BAM SRA Run Selector	Guy Lyons	Dec 31, 2017
GSE103693	The Identification and Characterization of Sindbis Virus RNA:Host Protein Interactions	Other Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	5	BAI BAM XLSX SRA Run Selector	Kevin J Sokoloski	Jan 02, 2018
GSE109874	Histone methyltransferase PRDM9 is not essential for meiosis in male mice	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	12	BAI BAM BEDGRAPH SRA Run Selector	Kevin Brick	Jun 07, 2019
GSE125053	High-resolution analysis of chromatin structure by Mnase-SSP	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	14	BAI BAM SRA Run Selector	Vijay Ramani	Feb 12, 2019
GSE16256	UCSD Human Reference Epigenome Mapping Project	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Homo sapiens	878	BAM BED WIG SRA Run Selector	UCSD AND SALK	Aug 03, 2009
GSE16368	UCSF-UBC Human Reference Epigenome Mapping Project	Genome binding/occupancy profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens	529	BAM BED TAB WIG SRA Run Selector	UCSF-UBC CENTER	Aug 03, 2009
GSE17312	BI Human Reference Epigenome Mapping Project	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by array	Homo sapiens	633	BAM BED CEL WIG SRA Run Selector	BROAD INSTITUTE	Aug 05, 2009
GSE18927	University of Washington Human Reference Epigenome Mapping Project	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by array Expression profiling by high throughput sequencing	Homo sapiens	758	BAM BED CEL TXT WIG SRA Run Selector	Northwest REMC	Jan 06, 2010
GSE19409	Ligand-dependent dynamics of retinoic acid receptor binding during early neurogenesis	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	6	BAM TXT SRA Run Selector	Shaun Mahony	Dec 10, 2010
GSE21823	Nucleosome map of the IMR90 fibroblast cell line	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	1	BAM SRA Run Selector	Benjamin Berman	Apr 01, 2011
GSE23716	H3K27me3 is not required for recruitment of Polycomb repressor complex 1 to target loci in mouse embryonic stem cells	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	9	BAM GFF3 SRA Run Selector	Stephen Taylor	Nov 30, 2011
GSE24178	Genome wide localization of Activation induced cytidine deaminase (AID), Spt5, and RNA Polymerase II (PolII) in mouse	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	7	BAM BEDGRAPH SRA Run Selector	Seolkyoung Jung	Oct 05, 2010
GSE24438	Genome wide maps of Dmc1 in testis of Hop2 null mice.	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	20	BAM BED SRA Run Selector	Ivan Gregoretti	Apr 04, 2011
GSE24632	ZNF274 colocalizes with the histone methyltransferase SETDB1 at ZNF 3' ends.	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	14	BAM BED BEDGRAPH BIGWIG TAGALIGN SRA Run Selector	Philip Cayting	Nov 15, 2010
GSE24685	Genome-wide binding of the orphan nuclear receptor TR4 suggests its general role in fundamental biological processes	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	15	BAM BED BIGWIG TAGALIGN SRA Run Selector	Philip Cayting	Nov 15, 2010
GSE26328	DNaseI Digital Genomic Footprinting from ENCODE/University of Washington [Human]	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	53	BAM BIGWIG BROADPEAK NARROWPEAK TXT SRA Run Selector	ENCODE DCC	Dec 29, 2010
GSE27030	Genome-wide binding profiles of the B-Myb-MuvB complex in HeLa cells	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	6	BAM PDF SRA Run Selector	Subhashini Sadasivam	Jan 25, 2012
GSE27929	Functional analysis of Kap1 genomic recruitment	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	17	BAM SRA Run Selector	Philip Cayting	May 24, 2011