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Accession Title Series type(s) Organism(s) Samples GDS Supplementary Contact Release date
Remove filtersFilter Remove filterGenome binding/occupancy profiling by high throughput sequencing Remove filterNARROWPEAK Remove filterHongjian Jin
GSE108364
Spontaneous DIPG Modeling Reveals Novel H3.3 K27M-Mediated Oncogenic Mechanisms Acting Through Epigenetic Effects
100 Hongjian Jin Jan 03, 2019
GSE115875
H3.3 K27M depletion increases differentiation and extends latency of diffuse intrinsic pontine glioma growth in vivo
130 Hongjian Jin Mar 18, 2019
GSE157095
Targeting KDM4B to disrupt the core regulatory transcription network governed by PAX3-FOXO1 in high-risk rhabdomyosarcoma
104 Hongjian Jin Sep 06, 2022
GSE164456
Histone lysine demethylase 4 family proteins maintain the transcriptional program and adrenergic cellular state of MYCN-amplified neuroblastoma
69 Hongjian Jin Mar 02, 2024
GSE164506
Exceptional response of high-risk neuroblastoma to RBM39 degrader Indisulam
34 Hongjian Jin Nov 24, 2021
GSE207035
KDM4 histone lysine demethylases maintain the adrenergic core regulatory circuitry programed by MYCN in neuroblastoma
30 Hongjian Jin Mar 02, 2024
GSE240506
Histone lysine demethylase 4 family proteins maintain the transcriptional program and adrenergic cellular state of MYCN-amplified neuroblastoma
26 Hongjian Jin Mar 02, 2024
GSE108344
Spontaneous DIPG Modeling Reveals Novel H3.3 K27M-Mediated Oncogenic Mechanisms Acting Through Epigenetic Effects [ChIP-seq]
  • Genome binding/occupancy profiling by high throughput sequencing
59 Hongjian Jin Jan 03, 2019
GSE115872
H3.3 K27M depletion increases differentiation and extends latency of diffuse intrinsic pontine glioma growth in vivo [ChIP-Seq]
  • Genome binding/occupancy profiling by high throughput sequencing
80 Hongjian Jin Mar 18, 2019
GSE157092
Targeting KDM4B to disrupt the core regulatory transcription network governed by PAX3-FOXO1 in high-risk rhabdomyosarcoma [ATAC-seq]
  • Genome binding/occupancy profiling by high throughput sequencing
14 Hongjian Jin Sep 06, 2022
GSE164450
KDM4 inhibition disrupts the core regulatory transcriptional circuitry in MYCN-driven neuroblastoma [ATAC-seq]
  • Genome binding/occupancy profiling by high throughput sequencing
8 Hongjian Jin Mar 04, 2024
GSE164451
KDM4 inhibition disrupts the core regulatory transcriptional circuitry in MYCN-driven neuroblastoma [ChIP-seq]
  • Genome binding/occupancy profiling by high throughput sequencing
20 Hongjian Jin Mar 04, 2024
GSE164454
KDM4 inhibition disrupts the core regulatory transcriptional circuitry in MYCN-driven neuroblastoma [Cut&Tag]
  • Genome binding/occupancy profiling by high throughput sequencing
8 Hongjian Jin Mar 04, 2024
GSE164504
Exceptional response of high-risk neuroblastoma to RBM39 degrader Indisulam (ATAC-Seq)
  • Genome binding/occupancy profiling by high throughput sequencing
6 Hongjian Jin Nov 24, 2021
GSE198753
Targeting KDM4 for treating PAX3-FOXO1-driven alveolar rhabdomyosarcoma [CUT&RUN, 2]
  • Genome binding/occupancy profiling by high throughput sequencing
18
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Hongjian Jin Sep 06, 2022
GSE198754
Targeting KDM4 for treating PAX3-FOXO1-driven alveolar rhabdomyosarcoma [CUT&Tag]
  • Genome binding/occupancy profiling by high throughput sequencing
10 Hongjian Jin Sep 06, 2022
GSE207012
CUT&Tag of KDM4A, B and C in BE2C cells
  • Genome binding/occupancy profiling by high throughput sequencing
6
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Hongjian Jin Mar 04, 2024
GSE218265
PAX3-FOXO1 expression in endothelial progenitors dictates myogenic reprogramming and rhabdomyosarcoma identity[Cut&Run]
  • Genome binding/occupancy profiling by high throughput sequencing
15
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Hongjian Jin Sep 30, 2023
GSE240504
Histone lysine demethylase 4 family proteins maintain the transcriptional program and adrenergic cellular state of MYCN-amplified neuroblastoma [ATAC-seq]
  • Genome binding/occupancy profiling by high throughput sequencing
4
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Hongjian Jin Mar 04, 2024
GSE262074
Cellular fitness of MYC-driven cancer cells to genetic and pharmacologic perturbations in normoxia, hypoxia and 3D
  • Genome binding/occupancy profiling by high throughput sequencing
6
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Hongjian Jin Jun 26, 2024