GEO Browser - GEO

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83 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Genome binding/occupancy profiling by high throughput sequencing			FA
GSE250094	De novo Assembly and Delivery of Synthetic Megabase-Scale Human DNA into Mouse Early Embryos	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Mus musculus Saccharomyces cerevisiae	38	BW FA GTF TDF TXT	Yue Liu	Apr 16, 2025
GSE272562	Dynamic activation of rAAV transgene expression by a small molecule that recruits endogenous transcriptional machinery	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens	46	BW FA GTF SF TXT	Austin J Hepperla	Apr 08, 2025
GSE247779	Skin regional specification and higher-order HoxC regulation [ATAC-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Gallus gallus	10	BED BIGWIG FA GTF NARROWPEAK	Ya-Chen Liang	Mar 25, 2025
GSE270275	Structure-guided development of high-performance antibodies targeting site-specific post-translational modifications	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	3	BED BEDGRAPH BIGWIG FA TAB TXT	Rohan Nishant Shah	Dec 02, 2024
GSE268512	Transposon and mRNA are distinguished by piRNA’s pairing and piRNA’s expression levels in Ovarian Somatic Cell.	Expression profiling by high throughput sequencing Other Non-coding RNA profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster	33	BED BEDGRAPH BW CSV FA FASTA GTF TSV TXT	Masaru Ariura	Nov 04, 2024
GSE273189	MatP local enrichment delays segregation independently of tetramer formation and septal anchoring in Vibrio cholerae	Genome binding/occupancy profiling by high throughput sequencing	Vibrio cholerae	14	FA TXT	Elena ESPINOSA	Oct 21, 2024
GSE220696	Chromatin plasticity contributes to neuronal selection during memory allocation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	6	CSV FA GTF MTX TSV	Can Aztekin	Jul 26, 2024
GSE199431	Position-dependent function of human sequence-specific transcription factors	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Chlorocebus sabaeus Homo sapiens Mus musculus	56	BED FA TSV TXT	Christopher Benner	Apr 26, 2024
GSE226502	Epigenetic evolution of the Ly49 gene family	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Mus musculus Rattus norvegicus	65	BEDGRAPH BW CSV FA HIC TXT	Changxu Fan	Apr 20, 2024
GSE249469	A fluorescent assay for cryptic transcription in Saccharomyces cerevisiae [MNase-seq]	Genome binding/occupancy profiling by high throughput sequencing	Saccharomyces cerevisiae	8	FA WIG	LeAnn Howe	Dec 06, 2023
GSE247492	The cullin Rtt101 promotes ubiquitin-dependent DNA-Protein Crosslink repair across the cell cycle	Genome binding/occupancy profiling by high throughput sequencing	Saccharomyces cerevisiae	16	BIGWIG FA	Julien Soudet	Nov 10, 2023
GSE244017	Uncoupling the distinct functions of HP1 proteins during heterochromatin establishment and maintenance	Genome binding/occupancy profiling by high throughput sequencing	Schizosaccharomyces pombe	87	BW FA FASTA GFF GFF3	Melissa Seman	Sep 26, 2023
GSE199946	A histone deacetylase network regulates epigenetic reprogramming and viral silencing in HIV infected cells	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	45	BW FA FASTA GTF	Jeremy Simon	Aug 08, 2023
GSE231618	The establishment of HP1-independent heterochromatin reveals an essential role for HP1 proteins in maintaining epigenetic memory	Genome binding/occupancy profiling by high throughput sequencing	Schizosaccharomyces pombe	24	BW FA FASTA GFF GFF3	Melissa Seman	May 10, 2023
GSE227135	Regualtion of 5hMC during Twist-indced EMT	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	3	BED FA XLSX	Ren Xu	Mar 16, 2023
GSE202902	SlWRKY33 confers cold tolerance through activation of various downstream signaling pathways in cultivated tomato	Genome binding/occupancy profiling by high throughput sequencing	Solanum lycopersicum	4	BW FA	Mingyue Guo	Feb 07, 2023
GSE181065	Genome wide mapping of Nr1d1 (Reverb α) binding sites in Th1 (T-helper type 1) cells	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	5	BED COD FA TSV ZIP SRA Run Selector	Pawan Gupta	Dec 30, 2022
GSE213881	Effect of Smc and interaction with ParA on ParB binding to DNA in Pseudomonas aeruginosa	Genome binding/occupancy profiling by high throughput sequencing	Pseudomonas aeruginosa	11	BED BIGWIG FA	Adam Kawałek	Dec 17, 2022
GSE176360	Single-cell chromatin landscapes supporting fibroblast polarization drives skin regeneration versus fibrosis in adult reindeer	Genome binding/occupancy profiling by high throughput sequencing	Rangifer tarandus	8	BED FA GTF H5 SRA Run Selector	Jeff Biernaskie	Dec 08, 2022
GSE206608	Genome-wide mapping of fluoroquinolone-induced gyrase cleavage sites displays drug specific effects that correlate with bacterial persistence	Genome binding/occupancy profiling by high throughput sequencing	Escherichia coli	72	FA FASTA TXT	Juechun Tang	Dec 05, 2022