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40 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Genome binding/occupancy profiling by high throughput sequencing			BW	Beisi Xu
GSE86981	The Dynamic Epigenetic Landscape of the Retina During Development, Reprogramming, and Tumorigenesis [ChIP-Seq_Hs]	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	72	BW SRA Run Selector	Beisi Xu	May 03, 2017
GSE87037	The Dynamic Epigenetic Landscape of the Retina During Development, Reprogramming, and Tumorigenesis [ChIP-Seq_Mm]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	311	BW SRA Run Selector	Beisi Xu	May 03, 2017
GSE87064	The Dynamic Epigenetic Landscape of the Retina During Development, Reprogramming, and Tumorigenesis	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Homo sapiens Mus musculus	868	BED BW MTX TSV TXT	Beisi Xu	May 03, 2017
GSE102092	The Dynamic Epigenetic Landscape of the Retina During Development, Reprogramming, and Tumorigenesis [ATAC-Seq_Mm]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	11	BW SRA Run Selector	Beisi Xu	Aug 01, 2017
GSE109712	Retinal Cell Type Epigenetic Memory Predicts Reprogramming Efficiency and Retinogenesis in 3D Organoid Cultures [ChIP-seq_Mm]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	332	BW SRA Run Selector	Beisi Xu	Jan 28, 2018
GSE102096	Novel MYC-driven medulloblastoma models generated by CRISPR activation of endogenous Myc	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	4	BW SRA Run Selector	Beisi Xu	Jun 12, 2018
GSE112560	ChIP-sequencing to investigate occupancy of wild-type and fusion ZNF384 proteins in murine pre-B cells	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	10	BW SRA Run Selector	Beisi Xu	Oct 18, 2018
GSE112561	Genomic classification and identification of the cell of origin of pediatric mixed phenotype acute leukemia	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	18	BW	Beisi Xu	Oct 18, 2018
GSE137778	Ybx1 negatively regulates PRC2 to affect gene expression programs for neural lineage specification and neural progenitor self-renewal and differentiation [ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	16	BW SRA Run Selector	Beisi Xu	Jun 16, 2020
GSE137853	Ybx1 negatively regulates PRC2 to affect gene expression programs for neural lineage specification and neural progenitor self-renewal and differentiation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	22	BW TXT	Beisi Xu	Jun 16, 2020
GSE127511	UTX/KDM6A suppresses AP-1 and a gliogenesis program during neural differentiation of human pluripotent stem cells[ATAC-seq]	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	8	BW SRA Run Selector	Beisi Xu	Nov 17, 2020
GSE127515	UTX/KDM6A suppresses AP-1 and a gliogenesis program during neural differentiation of human pluripotent stem cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	50	BW TXT	Beisi Xu	Nov 17, 2020
GSE163760	A distal Foxp3 enhancer enables interleukin-2 dependent thymic Treg cell lineage commitment for robust immune tolerance[ChIP-seq][Stat5]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	4	BW SRA Run Selector	Beisi Xu	Mar 16, 2021
GSE164118	A distal Foxp3 enhancer enables interleukin-2 dependent thymic Treg cell lineage commitment for robust immune tolerance	Other Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	46	BW TXT	Beisi Xu	Mar 16, 2021
GSE158105	Foxp3 enhancers synergize to maximize regulatory T cell suppressive capacity [ATAC-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	12	BW SRA Run Selector	Beisi Xu	May 10, 2021
GSE158223	Foxp3 enhancers synergize to maximize regulatory T cell suppressive capacity	Other Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	60	BW TXT	Beisi Xu	May 10, 2021
GSE153237	Acute depletion of CTCF rewires genome-wide chromatin accessibility	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens	8	BW SRA Run Selector	Beisi Xu	Aug 26, 2021
GSE149519	KDM6B promotes activation of the oncogenic CDK4/6-pRB-E2F pathway by maintaining enhancer activity in MYCN-amplified neuroblastoma [ATAC-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	6	BW SRA Run Selector	Beisi Xu	Oct 29, 2021
GSE149539	KDM6B promotes activation of the oncogenic CDK4/6-pRB-E2F pathway by maintaining enhancer activity in MYCN-amplified neuroblastoma	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	60	BED BW NARROWPEAK TXT	Beisi Xu	Oct 29, 2021
GSE166270	A dual role of human tRNA methyltransferase hTrmt13 in regulating translation and transcription [ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	3	BW SRA Run Selector	Beisi Xu	Oct 29, 2021