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2955 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Genome binding/occupancy profiling by high throughput sequencing			BEDGRAPH
GSE205799	Ethylene-induced flowering in Aechmea fasciata	Genome binding/occupancy profiling by high throughput sequencing	Aechmea fasciata	6	BEDGRAPH	Jiabin Wang	Jun 10, 2022
GSE218880	5-methyl cytosine profile and chromatin profile of Anthoceros agrestis	Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Anthoceros agrestis	20	BEDGRAPH BROADPEAK BW TXT	Tetsuya Hisanaga	Nov 10, 2023
GSE54727	Genome-wide profiling of H3K4me3, H3K27me3 H3K27me1 and 5mC enrichment and mRNA levels in young leaves of Arabidopsis lyrata	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Arabidopsis lyrata	12	BED BEDGRAPH TXT SRA Run Selector	François ROUDIER	Feb 03, 2015
GSE50636	Genome-wide profiling of H3K4me3 and H3K27me3 enrichment and mRNA levels in young leaves of Arabidopsis thaliana	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Arabidopsis thaliana	6	BED BEDGRAPH TXT SRA Run Selector	François ROUDIER	Jan 27, 2014
GSE52762	Arabidopsis Root Methylation and Root Nucleosome Positioning	Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Arabidopsis thaliana	3	BEDGRAPH SRA Run Selector	matteo pellegrini	Feb 11, 2014
GSE54894	Genome-wide profiling of H3K27me1 and 5mC enrichment in young leaves of Arabidopsis thaliana	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Arabidopsis thaliana	6	BED BEDGRAPH SRA Run Selector	François ROUDIER	Feb 03, 2015
GSE65876	Regulation of MIR165/166 by Class II and Class III homeodomain leucine zipper proteins establishes leaf polarity	Genome binding/occupancy profiling by high throughput sequencing	Arabidopsis thaliana	2	BEDGRAPH SRA Run Selector	Daniel Straub	Jan 01, 2018
GSE67776	A Genome-wide Chronological Study of Gene Expression and Two Histone Modifications, H3K4me3 and H3K9ac, during Developmental Leaf Senescence [ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Arabidopsis thaliana	14	BEDGRAPH SRA Run Selector	Judy Brusslan	Apr 11, 2015
GSE67778	A Genome-wide Chronological Study of Gene Expression and Two Histone Modifications, H3K4me3 and H3K9ac, during Developmental Leaf Senescence	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Arabidopsis thaliana	26	BEDGRAPH	Judy Brusslan	Apr 11, 2015
GSE70533	Genome-wide Identification of CCA1 Targets Uncovers an Expanded Clock Network in Arabidopsis	Genome binding/occupancy profiling by high throughput sequencing	Arabidopsis thaliana	7	BEDGRAPH TXT SRA Run Selector	Colleen J Doherty	Jul 26, 2015
GSE79453	Arabidopsis FORGETTER1 sustains stress-induced transcription through nucleosome remodeling	Genome binding/occupancy profiling by high throughput sequencing	Arabidopsis thaliana	12	BEDGRAPH SRA Run Selector	Isabel Bäurle	Oct 10, 2016
GSE81200	ENAP1 is involoved in the Histone H3K23 acetylation- and EIN3- mediated ethylene response	Genome binding/occupancy profiling by high throughput sequencing	Arabidopsis thaliana	16	BEDGRAPH NARROWPEAK SRA Run Selector	Hong Qiao	Sep 07, 2017
GSE89320	A Pair of Transposon-derived Proteins Function in A Histone Acetyltransferase Complex for Active DNA Demethylation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Arabidopsis thaliana	16	BEDGRAPH TDF WIG	Jian-Kang Zhu	Dec 29, 2016
GSE93875	An integrative analysis of different histone acetylation in ethylene response in Arabidopsis	Genome binding/occupancy profiling by high throughput sequencing	Arabidopsis thaliana	6	BEDGRAPH TXT SRA Run Selector	Hong Qiao	Aug 11, 2017
GSE95301	Chromatin-Bound ARGONAUTE 1 Promotes Gene Transcription in Response to Various Stimuli in Arabidopsis	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Arabidopsis thaliana	94	BEDGRAPH BIGWIG MATRIX TXT SRA Run Selector	Yijun Qi	Jan 04, 2018
GSE98214	Peroxisomal β-oxidation regulates histone acetylation and DNA methylation in Arabidopsis	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Arabidopsis thaliana	35	BEDGRAPH BW XLS SRA Run Selector	Yusheng Zhao	Apr 25, 2018
GSE99693	Locus-specific control of the de novo DNA methylation pathway [ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Arabidopsis thaliana	14	BEDGRAPH SRA Run Selector	Julie Law	Apr 14, 2018
GSE99694	Locus-specific control of the de novo DNA methylation pathway	Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Arabidopsis thaliana	93	BEDGRAPH WIG	Julie Law	Apr 14, 2018
GSE100011	Ectopic application of the repressive histone modification H3K9me2 establishes postzygotic reproductive isolation in Arabidopsis thaliana	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Arabidopsis thaliana	60	BEDGRAPH TXT SRA Run Selector	Juan C Santos-González	Jul 28, 2017
GSE101543	Polymerases IV and V affect Pol II transcription termination	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Arabidopsis thaliana	9	BEDGRAPH TXT SRA Run Selector	Ram Podicheti	Dec 10, 2017