GEO Browser - GEO

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70 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL24247	Genome binding/occupancy profiling by high throughput sequencing			TAR
GSE205051	Spatial epigenome-transcriptome co-profiling of mammalian tissues [CUT&TAG]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	1	TAR TSV	Di Zhang	Jan 29, 2023
GSE195882	Prmt5 deficiency inhibits CD4+T cells migration through Klf2-S1pr1 and ameliorates EAE disease (scATAC-seq)	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	2	TAR TSV	zheyi chen	Aug 09, 2023
GSE238149	Ikaros is a principal regulator of Aire+ mTEC homeostasis, thymic mimetic cell diversity, and central tolerance [Ikaros scATAC-seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	2	TAR	Jun Hyung Sin	Oct 25, 2023
GSE186184	Single-cell ATAC-Seq and RNa-seq of human and mouse basal cell carcinoma (BCC)	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	3	TAR	Anthony Oro	Oct 25, 2022
GSE201213	Single cell ATAC-seq of mouse hair follicle morphogenesis	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	3	H5 TAR	fang li	Nov 06, 2022
GSE228504	Exposure to lung-migrating helminth protects against murine SARS-CoV-2 infection through macrophage-dependent T cell activation	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	3	TAR	Oyebola Oyesola	May 31, 2023
GSE201749	Single-cell ATAC-sequencing analysis of mouse totipotent potential stem cells, extended pluripotent stem cells and embryonic stem cells	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	4	TAR	Yiming Sun	May 04, 2022
GSE234783	Functional identification of protocadherin alpha 9 (PCDHA9) as a candidate causative gene for amyotrophic lateral sclerosis	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	4	TAR	Dan Zhang	Jun 30, 2023
GSE259284	Deciphering cell states and genealogies of human hematopoiesis with single-cell multi-omics [Crispr_Mouse_Batch1]	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	4	H5 TAR TSV TXT	Chen Weng	Feb 26, 2024
GSE259285	Deciphering cell states and genealogies of human hematopoiesis with single-cell multi-omics [Crispr_Mouse_Batch2]	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	4	H5 TAR TSV	Chen Weng	Feb 26, 2024
GSE205052	Spatial epigenome-transcriptome co-profiling of mammalian tissues [ATAC-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	5	TAR TSV	Di Zhang	Jan 29, 2023
GSE179422	Single-cell RNA-seq and chromatin accessibility profiling decipher mouse gd T cell heterogeneity in peripheral lymph nodes, spleen and thymus	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	6	TAR SRA Run Selector	Quanli Yang	Jun 30, 2022
GSE190751	ChIP-seq data of CDYL in mouse dorsal root ganglia	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	6	TAR TXT SRA Run Selector	Zhao-wei' Sun	Feb 08, 2022
GSE218593	Spatial epigenome-transcriptome co-profiling of mammalian tissues	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	6	TAR TSV	Di Zhang	Jan 29, 2023
GSE228507	Exposure to lung-migrating helminth protects against murine SARS-CoV-2 infection through macrophage-dependent T cell activation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	7	H5 MTX TAR TSV	Oyebola Oyesola	May 31, 2023
GSE152628	Disease-specific exhaustion features and PD-1 immunotherapy responsiveness of antigen-specific CD8+ T cells at single-cell resolution	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	8	TAR	Jun Huang	Nov 29, 2022
GSE199177	The transcription factor IRF2 drives interferon-mediated CD8+ T cell exhaustion to restrict anti-tumor immunity	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	8	H5SEURAT TAR	David Brooks	Nov 10, 2022
GSE229892	Paired single nucleus RNA and ATAC sequencing on the role of diet and aging in hematopoietic stem and progenitor cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	8	TAR TBI TSV	Pura Muñoz-Cánoves	Apr 21, 2023
GSE266423	Single-cell transcriptome profiles of wild-type and IRF8KO microglia	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	8	H5 TAR TBI TSV	Keita Saeki	Jul 01, 2024
GSE171943	Spatial profiling of chromatin accessibility in mouse and human tissues	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	10	TAR TSV SRA Run Selector	Yanxiang Deng	May 20, 2022