GEO Browser - GEO

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42 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL24247	Genome binding/occupancy profiling by high throughput sequencing			TAB
GSE171771	Genome-wide quantitative functional enhancer map of mESCs, in the pluripotent state and after induced differentiation	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	9	BED BW NARROWPEAK TAB SRA Run Selector	Laura V Glaser	Oct 21, 2021
GSE183619	BAF complex cooperates with c-Myc to orchestrate early fate decisions of CD8 T cells	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Expression profiling by array	Mus musculus	101	BED BIGWIG CEL TAB	Douglas R Green	Apr 24, 2022
GSE208742	Direct neuronal reprogramming of mouse astrocytes is associated with multiscale epigenome remodeling and requires Yy1	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Mus musculus	64	BED BEDGRAPH BW MTX NARROWPEAK TAB TSV TXT XLSX SRA Run Selector	Boyan Bonev	Apr 30, 2024
GSE218649	Age-associated changes in murine endothelial gene expression and chromatin accessibility correlate with impaired blood-brain barrier integrity and elevated risk of intracerebral hemorrhage	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	79	BED TAB	Gilles Gasparoni	Sep 20, 2023
GSE218958	Regulation of IkB kinase family crosstalk by an N4BP1-caspase-8 axis	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	111	BED MTX TAB	Rohit Reja	Apr 01, 2024
GSE221350	Early methionine availability attenuates T cell exhaustion	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	48	BED BIGWIG TAB	Douglas R Green	May 29, 2025
GSE231307	CpG island turnover is associated with evolutionary changes in enhancer activity	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	76	BED BW TAB	James P. Noonan	May 10, 2023
GSE235624	MERTK inhibition for the treatment of tissue fibrosis	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	154	BED BEDGRAPH BIGWIG BW CLOUPE CSV H5 TAB TBI TSV	Ziyan Pan	Mar 05, 2024
GSE247083	Lysosomal catabolic activity governs the exit of the murine totipotent 2-cell state by silencing early-embryonic retrotransposons	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	38	BED TAB	hao wu	Aug 25, 2024
GSE299723	Methionine metabolism regulates T cell fate by KCa3.1 activity	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	38	BED BIGWIG TAB	Douglas R Green	Jun 12, 2025
GSE241384	Crypt density and recruited enhancers underlie intestinal tumour initiation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	46	BEDGRAPH BW TAB	Ramesh A. Shivdasani	Nov 15, 2024
GSE264006	Engineered extrachromosomal oncogene amplifications promote tumorigenesis	Expression profiling by high throughput sequencing Other Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	48	BEDGRAPH BW TAB	Andrea Ventura	Oct 05, 2024
GSE183419	Characterization of active chromatin marks by CUT&Tag after FOXD3 depletion	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	28	BIGWIG TAB SRA Run Selector	Robert Blelloch	Apr 30, 2023
GSE234680	THAP1 is a master regulator of zinc finger transcription factors guiding gastrulation of murine embryos	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus Rattus norvegicus	53	BIGWIG CLOUPE TAB TXT	Fubo Cheng	Aug 01, 2024
GSE272849	EOMES establishes mesoderm and endoderm differentiation potential through SWI/SNF-mediated global enhancer remodeling	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	119	BIGWIG TAB	Sebastian Arnold	Nov 08, 2024
GSE152663	SWI/SNF inactivation in the endometrial epithelium leads to loss of epithelial integrity	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	16	BROADPEAK TAB	Ronald L. Chandler	Oct 20, 2020
GSE212252	Balanced SET levels favor the correct enhancer repertoire during cell fate acquisition	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Danio rerio Homo sapiens Mus musculus	80	BROADPEAK HIC NARROWPEAK TAB	Luca Massimino	Sep 12, 2022
GSE138017	H3K4methylation in Setd1a loss-of-function Raw264.7 cells upon LPS or Dex+LPS stimulation	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	48	BW TAB TXT SRA Run Selector	Franziska Greulich	Dec 31, 2020
GSE164906	"Stripe" transcription factors provide accessibility to co-binding partners in mammalian genomes.	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Third-party reanalysis Genome variation profiling by high throughput sequencing	Mus musculus	476	BW TAB VCF	Yongbing Zhao	Jul 21, 2022
GSE171184	Integration of Feeding Behaviour by the Liver Circadian Clock Reveals Network Dependency of Metabolic Rhythms	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	38	BW NARROWPEAK TAB	Bioinformatics Unit	Jun 01, 2021