GEO Browser - GEO

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44 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL24247	Genome binding/occupancy profiling by high throughput sequencing			RDS
GSE247391	Fate-mapping via Spp1-expression history revealed innate immune memory of microglia imprinted by neonatal injury [Spp1Tdt]	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	60	ZIP RDS CSV BW	DANYANG HE	Jan 24, 2024
GSE216542	scRNA-seq, snATAC-seq, and spatial transcriptomics analysis of mammary glands of aged female mice	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	22	XLSX TXT TSV TIFF RDS PNG MTX JSON JPG CSV	Olga Anczukow	Sep 29, 2024
GSE228660	An atlas of gene regulatory networks for T memory cells in youth and old age [scATAC-seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	8	XLSX TSV RDS MTX BED	Joseph Wayman	Aug 07, 2023
GSE154175	A primed immune transcriptional program is activated in oligodendroglia in multiple sclerosis [SCATAC_10X]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	7	WIG TSV RDS H5 CSV BED SRA Run Selector	Eneritz Agirre	May 21, 2021
GSE193238	A primed immune transcriptional programme is activated in oligodendroglia in multiple sclerosis [ATAC-Seq and RNA-Seq]	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	4	WIG TSV TBI RDS H5 BEDPE	Eneritz Agirre	Jan 28, 2022
GSE153331	Glial Reactivity and Cognitive Decline Follow Chronic Heterochromatin Loss in Neurons	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	71	TXT RDS CSV COV BW BEDGRAPH SRA Run Selector	Andrew Newman	Jan 10, 2024
GSE161808	NRF1 Association with AUTS2-Polycomb Mediates Specific Gene Activation in the Brain	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	33	TXT RDS NARROWPEAK BW BIGWIG SRA Run Selector	sanxiong liu	Oct 11, 2021
GSE174226	High-content single-cell combinatorial indexing	Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	6	TXT TSV RDS CSV BED SRA Run Selector	Ryan M Mulqueen	May 28, 2021
GSE183764	9sCa: MSL2 is an allelic dosage sensor in mammals	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other Methylation profiling by high throughput sequencing	Mus musculus	244	TXT TSV RDS RDATA BW BEDPE BED SRA Run Selector	Asifa Akhtar	Aug 10, 2023
GSE183765	BlCa: MSL2 is an allelic dosage sensor in mammals	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	118	TXT TSV RDS RDATA BW BED SRA Run Selector	Asifa Akhtar	Aug 10, 2023
GSE183766	CaBl: MSL2 is an allelic dosage sensor in mammals	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus	171	TXT TSV RDS RDATA BW BED SRA Run Selector	Asifa Akhtar	Aug 10, 2023
GSE187332	Decay of heterochromatin domains at selective gene loci in aging mouse brain cells	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Other	Mus musculus	59	TXT RDS SRA Run Selector	Bing Ren	Sep 13, 2022
GSE196987	Durable Alterations of Hematopoiesis and Chromatin post-COVID-19 [MultiomeATAC-seq]	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	40	TXT RDS MTX CSV	Jin-Gyu Cheong	Jul 01, 2023
GSE196990	Durable Alterations of Hematopoiesis and Chromatin post-COVID-19	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	189	TXT RDS H5	Jin-Gyu Cheong	Feb 15, 2023
GSE214845	Dual gene activating and repressive functions of TET1 in germ layer lineage bifurcation distinguished by genomic context and dependence on 5-methylcytosine oxidation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	150	TXT TSV RDS NARROWPEAK MTX BW BIGWIG	Bernard Klaas van der Veer	Apr 12, 2023
GSE219015	Deciphering cell states and genealogies of human hematopoiesis with single-cell multi-omics	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	56	TXT TSV TAR RDS H5	Chen Weng	Nov 18, 2023
GSE244709	Astrocyte allocation during brain development is controlled by Tcf4-mediated fate restriction	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	20	TXT RDS NARROWPEAK CSV BROADPEAK	Yunli Xie	Aug 14, 2024
GSE245957	txci-ATAC-seq: a massive-scale single-cell technique to profile chromatin accessibility	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	2	TXT TSV TBI RDS	Ryan Mulqueen Mulqueen	Oct 20, 2023
GSE249687	Three-dimensional chromatin architecture in DRG neurons following sciatic nerve injury in WT and Rad21 KO mice.	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	52	TXT RDS HIC BW BED	Ilaria Palmisano	Aug 29, 2024
GSE274167	Eomesodermin dependence delineates the formation of spatially and functionally diverse extra-embryonic hematovascular tissues [Multiome]	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	28	TXT RDS	Bertie Gottgens	Apr 30, 2025