GEO Browser - GEO

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275 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL24247	Genome binding/occupancy profiling by high throughput sequencing			MTX
GSE144693	Beta cell-specific CD8+ T cells maintain stem-cell memory-associated epigenetic programs during type 1 diabetes	Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	39	BED MTX TSV	yiping fan	Apr 07, 2020
GSE198730	Transcriptomics, Regulatory Syntax, and Enhancer Identification in Heterogenous Populations of Mesoderm-Induced ESCs at Single-Cell Resolution	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	39	BED CSV H5 HIC MTX TBI TSV XLSX	Vittorio Sartorelli	Jul 31, 2022
GSE242487	SUMOylated Etv1 establishes tumor-initiating cells during mammary oncogenesis	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	39	BED BIGWIG MTX TSV	Zhijie Li	Mar 16, 2025
GSE196987	Durable Alterations of Hematopoiesis and Chromatin post-COVID-19 [MultiomeATAC-seq]	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	40	CSV MTX RDS TXT	Jin-Gyu Cheong	Jul 01, 2023
GSE249890	Antiandrogen treatment endows ZMYDN8 dependent epigenetic reprogramming to orchestrate neuroendocrine tumor transdifferentiation	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	40	BW MTX TSV	Hanling Wang	Dec 19, 2024
GSE180866	Harnessing matrix stiffness to engineer a bone marrow niche for hematopoietic stem cell rejuvenation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	41	BW CSV MTX TSV TXT SRA Run Selector	Dandan Cao	Apr 06, 2023
GSE199482	Divergent transcriptional regulation of astrocyte reactivity across disorders	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	41	BED H5 MTX TSV	Joshua Evan Burda	May 26, 2022
GSE181474	BCL6-dependent TCF-1+ progenitor cells maintain effector and helper CD4 T cell responses to persistent antigen	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	42	CSV MTX TSV	Ansuman T Satpathy	May 18, 2022
GSE228445	Dermal and hypodermal macrophages and dendritic cells	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	42	BED CSV MTX TSV XLSX	Keisuke Nagao	Sep 06, 2023
GSE246707	Liver-specific matrin-3 knockout regulates hepatic transcriptome and chromatin accessibility in mice	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	42	H5 MTX TSV	Xinghui Sun	Oct 01, 2024
GSE169262	Identification of a modular super-enhancer in murine retinal development	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	43	BED BW MTX TSV TXT XLS XLSX SRA Run Selector	Victoria Honnell	Nov 16, 2021
GSE202741	Jarid2 promotes temporal progression of retinal progenitors via repression of Foxp1	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	43	BW MTX TSV	Monica L. Vetter	Feb 15, 2023
GSE215112	KDM6A/UTX promotes spermatogenic gene expression across generations but is dispensable for male fertility	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	43	BED BROADPEAK MTX TSV	Bluma J Lesch	Oct 24, 2023
GSE222505	Regeneration signatures of TGFB1-treated mouse intestinal organoids and Ki67 positive primary cells sorted from mice after irradiation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	43	BED BW MTX TSV TXT	Lei Chen	Feb 08, 2023
GSE225724	Stepwise differentiation of follicular helper T cells reveals distinct developmental and functional states	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	43	CSV MTX TSV	Peter Sage	Oct 19, 2023
GSE246755	Enhancer adoption by an LTR retrotransposon generates viral-like particles causing developmental limb phenotypes	Other Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	43	BW HIC MTX TSV TXT	Juliane Glaser	Mar 15, 2025
GSE180947	Deciphering epigenetic and transcriptional alterations after Kmt2c/2d knock-out in mouse bladder urothelial cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	45	BW MTX TSV TXT SRA Run Selector	Naitao Wang	Aug 09, 2024
GSE229169	Comparative single cell epigenomic analysis of gene regulatory programs in the rodent and primate motor cortex	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Callithrix jacchus Homo sapiens Macaca mulatta Mus musculus	46	MTX TSV	Bing Ren	Oct 31, 2023
GSE262845	Antitumor progenitor exhausted CD8 T cells are sustained with TCR engagement	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	46	BW MTX TSV TXT	Tian Mi	Apr 05, 2024
GSE128671	Replicational dilution of H3K27me3 in mammalian cells and the role of poised promoters	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	47	BW MTX TSV TXT SRA Run Selector	Ramesh Shivdasani	Jan 17, 2020