GEO Browser - GEO

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270 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL24247	Genome binding/occupancy profiling by high throughput sequencing			CSV
GSE214264	3D genome structures of single differentiating mouse ES cells reveal a unique reorganisation of chromatin in the formative state	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	101	BROADPEAK BW CSV NARROWPEAK NCC TSV TXT	David Lando	Jan 19, 2024
GSE173588	A MYT1L Syndrome mouse model recapitulates patient phenotypes and reveals altered brain development due to disrupted neuronal maturation [ATAC-Seq]	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	29	CSV SRA Run Selector	Joseph Dougherty	Sep 22, 2021
GSE155882	A Transcriptional Switch Governs Fibroblast Activation in Heart Disease	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Other	Mus musculus	56	BED BIGWIG BW CSV MTX TSV WIG SRA Run Selector	Pawel Przytycki	Apr 08, 2021
GSE124596	A conserved noncoding locus modulates random monoallelic Xist expression across a TAD boundary	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	56	BED BEDGRAPH BW CSV TXT SRA Run Selector	Nicolas Servant	Dec 01, 2019
GSE166648	A genetic map of the murine dorsal vagal complex and its role in obesity [single-cell RNA-seq and ATAC-seq]	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	35	CSV SRA Run Selector	Tune Hannes Pers	Feb 12, 2021
GSE212606	A global view of aging and Alzheimer’s pathogenesis-associated cell population dynamics in mammalian brain	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	3	CSV TXT	Junyue Cao	May 26, 2023
GSE223519	A metabolic switch orchestrated by IL-18 and the cyclic dinucleotide cGAMP programs intestinal tolerance	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	2	CSV H5 TBI TSV	Insuk Lee	Jan 30, 2025
GSE166179	A primed immune transcriptional program is activated in oligodendroglia in multiple sclerosis	Genome binding/occupancy profiling by high throughput sequencing Other Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	1185	CSV H5 SF WIG	Eneritz Agirre	May 21, 2021
GSE154175	A primed immune transcriptional program is activated in oligodendroglia in multiple sclerosis [SCATAC_10X]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	7	BED CSV H5 RDS TSV WIG SRA Run Selector	Eneritz Agirre	May 21, 2021
GSE237304	ARID1B regulates BCL11B-mediated non-canonical Activin signaling to maintain mesenchymal stem cell homeostasis in the mouse incisor [scATAC-seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	2	CSV H5 TBI TSV	Mingyi Zhang	Mar 20, 2024
GSE237305	ARID1B regulates BCL11B-mediated non-canonical Activin signaling to maintain mesenchymal stem cell homeostasis in the mouse incisor.	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	10	CSV H5 MTX TBI TSV	Mingyi Zhang	Mar 20, 2024
GSE201141	ATAC-seq after EBF1 degradation	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	8	BW CSV NARROWPEAK	Nikolay Zolotarev	Nov 22, 2022
GSE255884	ATAC-seq for “HDAC1 controls the generation and maintenance of effector-like CD8+ T cells during chronic viral infection”	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	12	BIGWIG CSV NARROWPEAK	Wilfried Ellmeier	May 22, 2025
GSE268544	ATAC-seq of Keratinocytes and Langerhans cells in normal and hyperproliferative epithelium	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	16	CSV	Janin Chandra	Oct 30, 2024
GSE239752	ATAC-sequencing of genetically engineered intestinal organoid lines modeling colorectal cancer (CRC) progression	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	6	CSV	BiNGS Core	Oct 17, 2024
GSE194166	AXL targeting restores PD-1 blockade sensitivity of STK11/LKB1 mutant NSCLC through expansion of TCF1+ CD8 T cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	10	CSV H5 MTX TSV	Huiyu Li	Jan 24, 2022
GSE192575	Acquired semi-squamalization during chemotherapy suggests a differentiation therapy for bladder cancer	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	42	CSV GAPPEDPEAK TAR	Xaingyu Pan	Jul 09, 2022
GSE262871	An Lgr5-independent developmental lineage is involved in mouse intestinal regeneration (ATAC seq)	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	2	CSV	Gilbert Vassart	Mar 19, 2025
GSE201655	An activity-specificity trade-off encoded in human transcription factors	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	100	CSV MTX NARROWPEAK TAB TSV	Alexandre P Magalhaes	Feb 27, 2024
GSE296091	Analysis of changes in inter-cellular communications during Alzheimer's Disease pathogenesis reveals conserved changes in glutamatergic transmission in mice and humans	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	8	CSV MTX TBI TSV	Kevin T Beier	May 05, 2025