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1513 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL24247	Genome binding/occupancy profiling by high throughput sequencing			BW
GSE158435	Single-cell joint detection of chromatin occupancy and transcriptome enables higher-dimensional epigenomic reconstructions	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	16491	BED BW TXT SRA Run Selector	Haiqing Xiong	Mar 05, 2021
GSE129335	CoBATCH for high-throughput single-cell epigenomic profiling	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	6509	BED BW	Haiqing Xiong	Jul 15, 2019
GSE109762	Profiling chromatin state by single-cell itChIP-seq	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	3018	BED BW	Chen Li	Jul 11, 2019
GSE168415	DNMT3B supports meso-endoderm differentiation from mouse embryonic stem cells	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	1606	BW NARROWPEAK	Andrea Lauria	Jan 23, 2023
GSE185380	Multi-omics approaches reveal TNF-mediated inhibition of tissue reparative macrophages is via a gene-selective transcriptional mechanism	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	1573	BW	Assa Yeroslaviz	Jan 11, 2022
GSE146128	Functional Dissection of Transcription Factor Networks Governing Haematopoietic Progenitor States	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	1520	BED BW CSV SRA Run Selector	Bertie Gottgens	Oct 26, 2020
GSE87064	The Dynamic Epigenetic Landscape of the Retina During Development, Reprogramming, and Tumorigenesis	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Homo sapiens Mus musculus	868	BED BW MTX TSV TXT	Beisi Xu	May 03, 2017
GSE214496	DNA methylation restricts default deterministic fates towards neural and germline lineages	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	853	BW TXT	teissandier aurelie	Oct 09, 2023
GSE219240	Unbiased profiling of clinical kinase inhibitors’ effects in activated macrophages using chromatin modifications as high-content readouts	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	789	BW	Francesco Gualdrini	Apr 16, 2024
GSE229137	Autophagy engaging and non-engaging hematopoietic stem cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	607	BW NARROWPEAK	Paul Vincent Dellorusso	May 15, 2024
GSE234968	The histone H3 lysine 36 demethylases KDM2A and KDM2B restrict DNMT3A-mediated de novo DNA methylation in oocytes to support embryonic development	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	597	BW	Antoine Peters	Mar 27, 2025
GSE219239	Unbiased profiling of clinical kinase inhibitors’ effects in activated macrophages using chromatin modifications as high-content readouts [ChIP-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	564	BW TXT	Francesco Gualdrini	Apr 16, 2024
GSE215972	Epigenomic tomography for probing spatially-defined chromatin state in the brain	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	508	BW SRA Run Selector	Chang Lu	Oct 18, 2023
GSE164906	"Stripe" transcription factors provide accessibility to co-binding partners in mammalian genomes.	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Third-party reanalysis Genome variation profiling by high throughput sequencing	Mus musculus	476	BW TAB VCF	Yongbing Zhao	Jul 21, 2022
GSE189563	Mitotic bookmarking by SWI/SNF subunits	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	460	BED BW NARROWPEAK TXT	Zhexin Zhu	Mar 18, 2023
GSE154391	Symmetric inheritance of parental histones governs epigenome maintenance and stem cell identity	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	388	BW LOOM MTX TSV	Anja Groth	Jun 15, 2023
GSE230319	DNA-guided transcription factor cooperativity shapes face and limb mesenchyme	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	379	BW CSV NARROWPEAK	Seungsoo Kim	May 30, 2023
GSE250307	Decoding the determinants of genome-nuclear lamina interactions by a random scrambling approach	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	320	BW MCOOL	Bas van Steensel	Dec 19, 2023
GSE250306	Decoding the determinants of genome-nuclear lamina interactions by a random scrambling approach (pA-DamID)	Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	290	BW	Bas van Steensel	Dec 19, 2023
GSE221470	TET activity propagates transcriptional memory through embryonic dormancy	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	266	BED BW	Maximilian Stötzel	Mar 19, 2024