GEO Browser - GEO

Series

Samples

Platforms

DataSets

172 series

Export

Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL24247	Genome binding/occupancy profiling by high throughput sequencing			BEDGRAPH
GSE124596	A conserved noncoding locus modulates random monoallelic Xist expression across a TAD boundary	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	56	BED BEDGRAPH BW CSV TXT SRA Run Selector	Nicolas Servant	Dec 01, 2019
GSE128535	Histone 3 K9 and K27 acetylation of enhancers in response to thyroid hormone	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	56	BED BEDGRAPH TXT SRA Run Selector	Lars Grøntved	Jul 01, 2019
GSE135808	Topoisomerase 1 Nicking-dependent HP1gamma Engagement Mediates Acute Activation of Phase-separated Enhancers	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	167	BED BEDGRAPH BIGWIG	Yuliang Tan	Aug 04, 2022
GSE140363	Defining the relative and combined contribution of CTCF and CTCFL to genomic regulation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	122	BED BEDGRAPH BROADPEAK BW CSV HIC NARROWPEAK SRA Run Selector	Nishana Mayilaadumveettil	Apr 14, 2020
GSE141635	Histone modifications in lung epithelial cells	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	20	BED BEDGRAPH SRA Run Selector	Yoshihiko Kobayashi	Jun 02, 2020
GSE147879	Two competing mechanisms of DNMT3A recruitment regulate the dynamics of de novo DNA methylation at CpG islands	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Drosophila melanogaster Mus musculus	78	BED BEDGRAPH BW SRA Run Selector	Jacek Majewski	May 13, 2021
GSE155677	Multimodal profiling of the transcriptional regulatory landscape of the developing mouse cortex identifies Neurog2 as a key epigenome remodeler	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Escherichia coli Mus musculus	36	BED BEDGRAPH BW FA MTX PICKLE TAR TSV TXT SRA Run Selector	Boyan Bonev	Jan 27, 2022
GSE158196	Differential chromatin binding of the lung lineage transcription factor NKX2-1 resolves opposing murine alveolar cell fates in vivo [scATAC-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	1	BED BEDGRAPH BROADPEAK CLOUPE CSV H5 TBI TSV SRA Run Selector	Danielle R. Little	Mar 08, 2021
GSE158205	Differential chromatin binding of the lung lineage transcription factor NKX2-1 resolves opposing murine alveolar cell fates in vivo	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	78	BED BEDGRAPH BROADPEAK CLOUPE CSV H5 NARROWPEAK TBI TSV	Danielle R. Little	Mar 08, 2021
GSE160656	The chromatin and regulatory properties of pluripotency-associated poised enhancers are conserved in vivo [HiChIP]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	13	BED BEDGRAPH TXT SRA Run Selector	Giuliano Crispatzu	Dec 31, 2020
GSE160657	The chromatin and regulatory properties of pluripotency-associated poised enhancers are conserved in vivo	Genome binding/occupancy profiling by high throughput sequencing	Gallus gallus Mus musculus	28	BED BEDGRAPH BROADPEAK NARROWPEAK TXT	Giuliano Crispatzu	Dec 31, 2020
GSE160941	Oct1 cooperates with Smad transcription factors to promote mesodermal lineage specification [ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	7	BED BEDGRAPH SRA Run Selector	Dean Tantin	Nov 26, 2022
GSE160943	Oct1 cooperates with Smad transcription factors to promote mesodermal lineage specification	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	32	BED BEDGRAPH BEDPE BW	Dean Tantin	Nov 26, 2022
GSE185255	Integration of 3D genome architecture and local chromatin features uncovers enhancers underlying craniofacial-specific cartilage defects	Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	24	BED BEDGRAPH COOL NARROWPEAK SRA Run Selector	Qian Bian	Jan 04, 2023
GSE185648	Ku70/HP1g are presented at the KCl induced acutely activated enhancers [ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	20	BED BEDGRAPH SRA Run Selector	Yuliang Tan	Aug 04, 2022
GSE185649	Topo1cc siganls are presented at the KCl induced acutely activated enhancers [CUT&RUN]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	9	BED BEDGRAPH SRA Run Selector	Yuliang Tan	Aug 04, 2022
GSE188482	Ablation of cDC2 specification by triple mutations in the Zeb2 enhancer [CUT&RUN]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	9	BED BEDGRAPH TXT SRA Run Selector	Tiantian Liu	Apr 19, 2022
GSE188579	Ablation of cDC2 development by triple mutations within the Zeb2 enhancer	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	21	BED BEDGRAPH TXT	Tiantian Liu	Apr 19, 2022
GSE192984	Histone H1 facilitates restoration of H3K27me3 during DNA replication by chromatin compaction	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	71	BED BEDGRAPH TXT	Yu Juan	May 01, 2022
GSE193357	The transcriptional regulator Prdm1 is a master gene for the early development of the sensory whisker follicle and is wired to the Lef1 circuitry.	Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	10	BED BEDGRAPH BW	Pierluigi Giuseppe Manti	Oct 19, 2022