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3009 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL19057	Genome binding/occupancy profiling by high throughput sequencing
GSE175801	β-catenin, Tcf7l1, and Esrrb mediate seeding density-dependent gene regulation during mouse embryonic stem cell differentiation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	67	TSV TXT SRA Run Selector	Jonghwan Kim	Nov 24, 2021
GSE123690	β-catenin safeguards the ground state of pluripotency by strengthening the robustness of the transcriptional apparatus [ATAC-seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	6	BW SRA Run Selector	Yiwei Lai	Jul 01, 2020
GSE123692	β-catenin safeguards the ground state of pluripotency by strengthening the robustness of the transcriptional apparatus	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	24	BW TXT	Yiwei Lai	Jul 01, 2020
GSE108620	β-catenin associated protein complex maintains ground state mouse embryonic stem cell by regulating lineage development	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	50	BW CSV SRA Run Selector	Shiyuan (Cynthia) Chen	Aug 20, 2020
GSE150275	µATACseq: ATACseq with as few as 100 cells	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	8	NARROWPEAK SRA Run Selector	Neil Segil	Jul 09, 2021
GSE229994	tumor-infiltrating CD8+ T cells from tumor-bearing mice transferred Nrf2-deficient CD8+ T cells.	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	11	BW GTF MTX TSV	YUNA JO	Apr 01, 2024
GSE260497	the effect of knockout Brd7 on 4T07-TGL cells under in vitro condition	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	8	BW	Junfeng Zhang	Dec 06, 2024
GSE187444	single ATAC-seq of subfractions within hematopoietic stem cells in bone marrow	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	8	BW SRA Run Selector	Terumasa Umemoto	Jan 19, 2022
GSE122713	scRNA-seq, bulk RNA-seq, and ATAC-seq data from progenitor exhausted and terminally exhausted CD8+ T cells from tumors and chronic viral infection	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	72	NARROWPEAK	Kevin Bi	Nov 20, 2018
GSE132266	scChIC-seq reveals focusing of global chromatin domains during differentiation	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	80	CSV TXT SRA Run Selector	Jake Yeung	May 10, 2024
GSE198561	scATAC-seq over multiple time points of heart development in WT C57Bl6/J embryos and in Tbx1 mutant mice (Tbx1 KO)	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	27	TSV	Sanjeev Ranade	Jul 27, 2022
GSE174456	scATAC-seq of Inguinal Adipose Tissue of UCP1-KO and WT mice.	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	2	H5 SRA Run Selector	Kosaku Shinoda	May 15, 2021
GSE198567	scATAC-seq and scRNA-seq over multiple time points of heart development in WT C57Bl6/J embryos and in Tbx1 mutant mice (Tbx1 KO)	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	51	TSV	Sanjeev Ranade	Jul 26, 2022
GSE181408	scATAC-seq analysis of Msi2CreER-MycT58A Mouse Pre-cancer and Pancreas ASCP tumor	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	2	H5 SRA Run Selector	Michael Hamilton	Mar 01, 2023
GSE145268	p63 Maintains the Proliferative Potential of Salivary Gland Stem/Progenitor Cells by Regulating Follistatin, a Key Mediator of TGF-b/Activin Signaling	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	12	CSV	Jonathan E Bard	Sep 23, 2020
GSE231701	p53 restoration in small cell lung cancer identifies a latent cyclophilin-dependent necrosis mechanism (ChIP-Seq)	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	30	BW	Jonuelle Acosta	Jun 05, 2023
GSE231705	p53 restoration in small cell lung cancer identifies a latent cyclophilin-dependent necrosis mechanism	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	72	BW	Jonuelle Acosta	Jun 05, 2023
GSE231676	p53 governs an alveolar type 1 differentiation program in lung cancer suppression [in_vivo_ATAC_seq1]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	4	H5	Laura D Attardi	May 04, 2023
GSE231681	p53 governs an alveolar type 1 differentiation program in lung cancer suppression	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	45	H5 TSV	Laura D Attardi	May 04, 2023
GSE207880	p53 ensures adequate S-adenosylmethionine to prevent R-loop-associated epigenetic and genomic instability	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	20	BW	panatta emanuele	Aug 24, 2022