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1348 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL19057	Genome binding/occupancy profiling by high throughput sequencing			BW
GSE237827	Flexible and scalable control of T cell memory by a reversible epigenetic switch (ATAC-seq)	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	11	BW TXT	Kathleen Abadie	Jul 25, 2023
GSE237830	Flexible and scalable control of T cell memory by a reversible epigenetic switch	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	24	BW H5 MTX TSV TXT	Kathleen Abadie	Jul 25, 2023
GSE141844	PDGFRA Defines the Mesenchymal Stem Cell Kaposi’s Sarcoma Progenitors by Enabling KSHV Oncogenesis in an Angiogenic Environment [ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	16	BW SRA Run Selector	Martin Carlos Abba	Dec 12, 2019
GSE115294	Genome-wide mapping of Yap1 in the normal and hypertrophied hearts	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	3	BW XLSX SRA Run Selector	Maha Abdellatif	Jun 05, 2018
GSE119391	ACAA2 and OGDH bind to H2A.Z-occupied transcription start sites	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	5	BW SRA Run Selector	Maha Abdellatif	Sep 01, 2019
GSE165271	H3K9-butyryl (H3K9Bu) and H3K9-acetyi (H3K9ac) genome patterns before and after transverse aortic constriction in Balb/cJ and Balc/cByJ mice	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	9	BW SRA Run Selector	Maha Abdellatif	May 11, 2021
GSE165279	The effect of diet on H3K9-butyryl and H3K9-acetyl in the heart before and after transverse aortic constriction in C57Bl/6J mice	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	14	BW XLSX SRA Run Selector	Maha Abdellatif	May 11, 2021
GSE165284	ACAA2 genome-binding patterns before and after transverse aortic constriction in C57Bl/6J mice on different diets [ACAA2]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	5	BW XLSX SRA Run Selector	Maha Abdellatif	May 11, 2021
GSE227226	The effect of a BCCA-free, with 1% propionate, diet on 1W pressure overload-induced H3K23-propionyl [BCAA-free-1W-TAC with propionate-ChIP-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	5	BW XLSX	Maha Abdellatif	Aug 25, 2023
GSE227227	The effect of a BCCA-free diet on 1W pressure overload-induced H3K23-propionyl [BCAA-free-1W-TAC-ChIP-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	4	BW XLSX	Maha Abdellatif	Aug 25, 2023
GSE227228	The effect of a BCCA-free diet on 2W pressure overload-induced H3K23-propionyl [BCAA-free-2W-TAC-ChIP-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	5	BW XLSX	Maha Abdellatif	Aug 25, 2023
GSE229131	Lowering dietary BCAA reduces fibrosis, enhances mitochondrial respiration, and curbs cardiac hypertrophy, via regulating histone H3K23-propionylation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	50	BW	Maha Abdellatif	Aug 25, 2023
GSE93431	Two independent modes of chromosome organization are revealed by cohesin removal	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	32	BW CSV HDF5 NARROWPEAK TSV TXT SRA Run Selector	Nezar Abdennur	Jun 10, 2017
GSE192875	Transcriptional regulation of the thymus master regulator Foxn1	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	72	BROADPEAK BW NARROWPEAK	Jakub Abramson	Aug 03, 2022
GSE169561	In vivo dissection of a clustered-CTCF domain boundary reveals developmental principles of regulatory insulation	Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	42	BW HIC	Rafael Domínguez Acemel	May 05, 2022
GSE197629	In vivo dissection of a clustered-CTCF domain boundary reveals developmental principles of regulatory insulation [ChIPmentation]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	25	BW	Rafael Domínguez Acemel	May 05, 2022
GSE231701	p53 restoration in small cell lung cancer identifies a latent cyclophilin-dependent necrosis mechanism (ChIP-Seq)	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	30	BW	Jonuelle Acosta	Jun 05, 2023
GSE231705	p53 restoration in small cell lung cancer identifies a latent cyclophilin-dependent necrosis mechanism	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	72	BW	Jonuelle Acosta	Jun 05, 2023
GSE200696	Integrator endonuclease drives promoter-proximal termination at all RNAPII transcribed loci (ChIP-Seq)	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	10	BW	Karen Adelman	Oct 28, 2022
GSE142238	Cross-species analysis of melanoma enhancer logic using deep learning	Genome binding/occupancy profiling by high throughput sequencing	Canis lupus familiaris Danio rerio Equus caballus Homo sapiens Mus musculus Sus scrofa domesticus	23	BW SRA Run Selector	Stein Aerts	Apr 22, 2020