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600 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL19057	Genome binding/occupancy profiling by high throughput sequencing			BED
GSE56526	BRD4 dynamics reveal novel acrosome-dependent chromatin reorganization during post-meiotic mammalian sperm development	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	9	BED BW SRA Run Selector	Gregory Donahue	Mar 06, 2015
GSE69227	Combined heterozygous loss of Ebf1 and Pax5 allows for T-lineage conversion of B-cell progenitors	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	36	BED SRA Run Selector	Rajesh Somasundaram	May 27, 2015
GSE69483	Control of stomach smooth muscle development and intestinal rotation by transcription factor BARX1 (ChIP-seq)	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	2	BED BW SRA Run Selector	Chenura Jayewickreme	Jun 03, 2015
GSE65360	Single-cell chromatin accessibility data using scATAC-seq	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	1632	BED SRA Run Selector	Jason Daniel Buenrostro	Jun 17, 2015
GSE61673	Nkx2.2, Nkx6.1, Olig2, and Gli3 genomic binding regions in neural progenitors [ChIP-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	13	BED TXT SRA Run Selector	Yuichi Nishi	Aug 24, 2015
GSE65462	Nkx2.2, Nkx6.1, Olig2, and Gli3 genomic binding regions and overexpression in neural progenitors	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	28	BED	Yuichi Nishi	Aug 24, 2015
GSE70766	Distinct processes and transcriptional targets underlie CDX2 requirements in intestinal stem cells and differentiated villus cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	11	BED BW GTF TXT SRA Run Selector	Ramesh Shivdasani	Sep 15, 2015
GSE73215	Dose-dependent role of the cohesin complex in normal and malignant hematopoiesis [ATAC-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	8	BED SRA Run Selector	James Bradner	Sep 21, 2015
GSE73218	Dose-dependent role of the cohesin complex in normal and malignant hematopoiesis	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	16	BED	James Bradner	Sep 21, 2015
GSE72720	CTCF binding polarity determines chromatin looping	Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	506	BED WIG	Elzo de Wit	Oct 29, 2015
GSE75426	Local compartment changes and regulatory landscape alterations in histone H1-depleted cells	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	41	BED TXT SRA Run Selector	Geert Geeven	Nov 30, 2015
GSE73912	Next Generation Sequencing Facilitates Quantitative Analysis of RNAs bound by DDX5 and RORgt in cultured T helper 17 cell [ChIRP-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	9	BED BW SRA Run Selector	Wendy Huang	Dec 21, 2015
GSE75177	Comparison of expression profiles of WT and Nrf2AY/AY mutant macrophages under electrophilic stress agent	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	24	BED	Masayuki Yamamoto	Jan 04, 2016
GSE74315	Pet-1 Switches Transcriptional Targets Postnatally to Regulate Maturation of Serotonin Neuron Excitability.	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	20	BED TXT SRA Run Selector	Evan Deneris	Jan 08, 2016
GSE73865	Genome-wide map of SIX2 and SIX1 binding in human embryonic kidney cortex	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	21	BED WIG SRA Run Selector	Andrew P McMahon	Jan 31, 2016
GSE73867	Nephron endowment	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	23	BED TXT WIG	Andrew P McMahon	Jan 31, 2016
GSE69101	Comprehensive Epigenomic Analysis Reveals Dynamic Regulatory Programs Of Blood Development	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	77	BED BW	MS Vijayabaskar	Feb 25, 2016
GSE73372	AP-1 family members act at DNA targets in conjunction with Sox9 to promote chondrocyte hypertrophy	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	6	BED XLSX SRA Run Selector	Xinjun He	Feb 29, 2016
GSE65167	ChIP-seq analysis of Arid1a and C/ebpα in the mouse livers	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	21	BED BIGWIG BROADPEAK SRA Run Selector	Xuxu Sun	Mar 30, 2016
GSE57559	Hypersensitive Nucleosomes in Chromatin Are Intrinsic to the Structure of Active, Tissue-Specific Enhancers	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	54	BED BW	Gregory Donahue	Apr 08, 2016