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33 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Genome binding/occupancy profiling by high throughput sequencing					Oct 31, 2023
GSE229169	Comparative single cell epigenomic analysis of gene regulatory programs in the rodent and primate motor cortex	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Callithrix jacchus Homo sapiens Macaca mulatta Mus musculus	46	MTX TSV	Bing Ren	Oct 31, 2023
GSE160365	Genome-wide map of Acetyl-H3K27 marked chromatin in pancreatic cancer cells treated with vehicle and acetate under low pH condition	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	4	XLSX SRA Run Selector	Pankaj K Singh	Oct 31, 2023
GSE203322	BRD9 determines the cell fate of hematopoietic stem cells by regulating chromatin state	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	60	BIGWIG BW MTX RESULTS TSV TXT	Masaki Nomura	Oct 31, 2023
GSE210815	Outward-oriented sites within clustered CTCF boundaries are key for intraTAD chromatin interactions and gene regulation [ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	147	BEDGRAPH TXT WIG	Xiao Ge	Oct 31, 2023
GSE210817	Outward-oriented sites within clustered CTCF boundaries are key for intraTAD chromatin interactions and gene regulation	Genome binding/occupancy profiling by high throughput sequencing Other Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	571	BEDGRAPH FPKM_TRACKING WIG	Xiao Ge	Oct 31, 2023
GSE215160	Hormone-induced enhancer assembly requires an optimal level of hormone receptor multivalent interactions	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	63	BW	Zhijie Jason Liu	Oct 31, 2023
GSE215161	Androgen receptor requires an optimal level of condensation to assemble androgen-induced active enhancers [ChIP-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	6	BW	Zhijie Jason Liu	Oct 31, 2023
GSE215163	Hormone-induced enhancer assembly requires an optimal level of hormone receptor multivalent interactions	Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens	73	BW	Zhijie Jason Liu	Oct 31, 2023
GSE216237	Study of differential chromatin accessibility within primary breast epithelial cells from healthy donor and its TONSL overexpressing counterpart	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	6	XLSX	Harikrishna Nakshatri	Oct 31, 2023
GSE216241	TONSL is an immortalizing oncogene of the chromosome 8q24.3 amplicon and new therapeutic target in breast cancer	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens	24		Harikrishna Nakshatri	Oct 31, 2023
GSE236326	BRD9 determines the cell fate of hematopoietic stem cells by regulating chromatin state [human_Brd9_ATAC-seq]	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	6	BIGWIG	Masaki Nomura	Oct 31, 2023
GSE236328	BRD9 determines the cell fate of hematopoietic stem cells by regulating chromatin state [human_Brd9_CTCF-ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	4	BIGWIG	Masaki Nomura	Oct 31, 2023
GSE236960	BRD9 determines the cell fate of hematopoietic stem cells by regulating chromatin state	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	10	BW TXT	Weijia Zang	Oct 31, 2023
GSE244029	Single cell ATAC-sequencing analysis of human SUV39H1-knockout CAR T compared to control CAR T cells (mock) in a xenograft model of lung adenocarcinoma	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	6	BED CSV MTX TBI TSV	Sebastian Amigorena	Oct 31, 2023
GSE246410	The H2Bub1-deposition complex is required for human and mouse cardiogenesis (ChIP-Seq)	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	42	BW	Syndi Barish	Oct 31, 2023
GSE246413	The H2Bub1-deposition complex is required for human and mouse cardiogenesis	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	63	BW	Syndi Barish	Oct 31, 2023
GSE185642	Integrative multi-omic profiling of adult mouse brain endothelial cells and potential implications in Alzheimer’s disease	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	21	TXT SRA Run Selector	Yage Nie	Oct 31, 2023
GSE203315	BRD9 determines the cell fate of hematopoietic stem cells by regulating chromatin state [ATAC-Seq I]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	2	BIGWIG	Masaki Nomura	Oct 31, 2023
GSE203317	BRD9 determines the cell fate of hematopoietic stem cells by regulating chromatin state [ChIP-Seq I]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	8	BIGWIG	Masaki Nomura	Oct 31, 2023
GSE203318	BRD9 determines the cell fate of hematopoietic stem cells by regulating chromatin state [ATAC-Seq II]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	2	BW	Masaki Nomura	Oct 31, 2023