GEO Browser - GEO

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32 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Genome binding/occupancy profiling by high throughput sequencing					May 31, 2023
GSE166330	Genome-wide occupancy profile of ARID1A in the presence and absence of epidermal growth factor stimulation in murine acinar cell line 266-6 (ChIP-seq)	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	4	BED BIGWIG SRA Run Selector	Zhe Zhang	May 31, 2023
GSE166331	Genome-wide maps of H3K27ac ocupancy on chromatin in murine acinar cell line upon EGF treatment and Arid1a silencing	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	8	BED BIGWIG SRA Run Selector	Zhe Zhang	May 31, 2023
GSE166332	Analysis of chromatin accessibility in Arid1a-deficient murine primary pancreatic acinar cells using ATAC-seq	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	6	BIGWIG SRA Run Selector	Zhe Zhang	May 31, 2023
GSE166334	NFATc1 is a central mediator of EGFR-induced ARID1A chromatin dissociation during acinar cell reprogramming	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	34	BED BIGWIG TXT	Zhe Zhang	May 31, 2023
GSE184391	BACH1 Deficiency Prevents Neointima Formation and Maintains the Differentiated Phenotype of Vascular Smooth Muscle Cell by Regulating Chromatin Accessibility	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	20	BW FPKM_TRACKING SRA Run Selector	Jieyu Guo	May 31, 2023
GSE196731	Chromatin Accessibility Mapping of Primary Erythroid Cell Populations Leads to Identification and Validation of NFIX As a Novel Fetal Hemoglobin Repressor	Genome binding/occupancy profiling by high throughput sequencing Third-party reanalysis	Homo sapiens	27	TXT	Mudit Chaand	May 31, 2023
GSE209889	LSD1 inhibition disrupts super-enhancer activities in CRPC	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens	58	MTX TSV	Changmeng Cai	May 31, 2023
GSE209895	Genomic analysis reveals HDAC1 regulates clinically relevant transcriptional programs in Pancreatic cancer	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	8	BED BIGWIG	Sara Cooper	May 31, 2023
GSE211409	Distinct SWI/SNF chromatin remodelling complexes act differentially to maintain stem-like exhausted CD8 T cells [ATAC-seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	10	BW TXT	E JOHN WHERRY	May 31, 2023
GSE211411	Distinct SWI/SNF chromatin remodelling complexes act differentially to maintain stem-like exhausted CD8 T cells.	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	21	BW	E JOHN WHERRY	May 31, 2023
GSE211541	Opposing transcriptional circuits governing skeletal muscle development and maturation revealed at single nuclear resolution [ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	6	BED BIGWIG	kenian chen	May 31, 2023
GSE211542	Opposing transcriptional circuits governing skeletal muscle development and maturation revealed at single nuclear resolution [snATAC-seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	5	MTX TSV	kenian chen	May 31, 2023
GSE211545	Opposing transcriptional circuits governing skeletal muscle development and maturation revealed at single nuclear resolution.	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	16	BED BIGWIG MTX TSV	kenian chen	May 31, 2023
GSE213803	A single-cell multi-modal ATAC + gene expression sequencing in tendinopathy	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	2	TXT	JUNFENG GUO	May 31, 2023
GSE214111	Enhanced STAT5a activation opposes Tox and rewires exhausted CD8 T cells towards a hybrid durable effector-like state during chronic stimulation [ATAC-postInfection]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	15	BED BW CSV TXT	E JOHN WHERRY	May 31, 2023
GSE214112	Enhanced STAT5a activation opposes Tox and rewires exhausted CD8 T cells towards a hybrid durable effector-like state during chronic stimulation [ATAC-postChallenge]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	12	BED BW CSV TXT	E JOHN WHERRY	May 31, 2023
GSE214116	Enhanced STAT5a activation opposes Tox and rewires exhausted CD8 T cells towards a hybrid durable effector-like state during chronic stimulation	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Other	Mus musculus	62	BED BW MTX TSV	E JOHN WHERRY	May 31, 2023
GSE217444	The Chd4 helicase regulates chromatin accessibility and gene expression critical for β-cell function in vivo [ATAC-seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	6	NARROWPEAK	Jason Spaeth	May 31, 2023
GSE217446	The Chd4 helicase regulates chromatin accessibility and gene expression critical for β-cell function in vivo.	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	14	NARROWPEAK TAB	Jason Spaeth	May 31, 2023
GSE219007	The cholesterol transporter NPC1 is essential for epigenetic regulation and maturation of oligodendrocyte lineage cells ChIP-seq	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	4	BW	Andrew Lieberman	May 31, 2023