GEO Browser - GEO - NCBI

NCBI » GEO » Repository browser » SeriesLogin

Series

Samples

Platforms

DataSets

Summary | Advanced search

17 series

Export

Accession	Title	Series type(s)	Organism(s)	Samples	GDS	Supplementary	Contact	Release date
Filter	Platform: GPL24247	Genome variation profiling by high throughput sequencing	Mus musculus
GSE115017	Whole exome sequencing analyzed the off-target effect of gene editing through BE3 system.	Genome variation profiling by high throughput sequencing	Mus musculus	14		VCF SRA Run Selector	Qing Li	Aug 06, 2018
GSE147069	DDX3X suppresses neural lineage susceptibility to medulloblastoma [DNA-Seq]	Genome variation profiling by high throughput sequencing	Mus musculus	13		TXT SRA Run Selector	Richard Gilbertson	Mar 19, 2020
GSE147180	DDX3X suppresses neural lineage susceptibility to medulloblastoma	Genome variation profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	270			Richard Gilbertson	Mar 19, 2020
GSE148478	Stimulation of oncogene-specific tumor infiltrating T-cells through combined vaccine and alpha-PD1 enable sustained anti-tumor responses against established HER2 breast cancer (BC) [WXS]	Genome variation profiling by high throughput sequencing	Mus musculus	20		VCF SRA Run Selector	Zachary Conrad Hartman	Apr 11, 2020
GSE148482	Stimulation of oncogene-specific tumor infiltrating T-cells through combined vaccine and alpha-PD1 enable sustained anti-tumor responses against established HER2 breast cancer (BC)	Expression profiling by high throughput sequencing Genome variation profiling by high throughput sequencing	Mus musculus	70		CSV TSV TXT VCF	Zachary Conrad Hartman	Apr 11, 2020
GSE143815	Primary tumors and metastases from the NPK (Nkx3.1CreERT2/+; Ptenflox/flox; KrasLSL-G12D/+; R26R-CAG-LSL-EYFP/+) prostate cancer mouse model	Expression profiling by high throughput sequencing Genome variation profiling by high throughput sequencing	Mus musculus	87			Antonina Mitrofanova	Aug 11, 2020
GSE189078	EBF1 contributes to the balance of lympho-myeloid fate in haematopoietic progenitors via B-lymphoid priming and Cebpa antagonism	Expression profiling by high throughput sequencing Genome variation profiling by high throughput sequencing	Mus musculus	32		BW H5	Aurelie Lenaerts	Jun 30, 2022
GSE164906	"Stripe" transcription factors provide accessibility to co-binding partners in mammalian genomes.	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Third-party reanalysis Genome variation profiling by high throughput sequencing	Mus musculus	476		BW TAB VCF	Yongbing Zhao	Jul 21, 2022
GSE165136	SNP effect on chromatin accessibility (Whole genome sequencing)	Genome variation profiling by high throughput sequencing	Mus musculus	3		VCF SRA Run Selector	Yongbing Zhao	Jul 21, 2022
GSE211975	Circadian clock controls rhythms in ketogenesis by interfering with PPARa transcriptional network	Genome variation profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	36		TXT	Roman Kondratov	Aug 31, 2022
GSE220997	Pre-clinical models for prediction of immunotherapy outcomes and immune evasion mechanisms in genetically heterogeneous multiple myeloma	Expression profiling by high throughput sequencing Other Genome variation profiling by high throughput sequencing	Mus musculus	108		RDS	Cristina Perez	Jan 31, 2023
GSE181581	IGF2BP1 induces neuroblastoma via a druggable feedforward loop with MYCN promoting 17q oncogene expression [mouse sWGS]	Genome variation profiling by high throughput sequencing	Mus musculus	24		CSV SRA Run Selector	Danny Misiak	May 31, 2023
GSE181582	IGF2BP1 induces neuroblastoma via a druggable feedforward loop with MYCN promoting 17q oncogene expression	Expression profiling by high throughput sequencing Genome variation profiling by high throughput sequencing	Homo sapiens Mus musculus	264			Danny Misiak	May 31, 2023
GSE209815	Characterization of a strain-specific Cd1 reference genome reveals potential inter- and intra-strain functional variability [gDNA]	Genome variation profiling by high throughput sequencing	Mus musculus	5		BED FA GTF TXT VCF	Isaac Jacob Kremsky	Jun 08, 2023
GSE209816	Characterization of a strain-specific Cd1 reference genome reveals potential inter- and intra-strain functional variability	Genome binding/occupancy profiling by high throughput sequencing Genome variation profiling by high throughput sequencing	Mus musculus	9		NARROWPEAK	Isaac Jacob Kremsky	Jun 08, 2023
GSE214438	Age-associated chromatin re-organization in progenitor B cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other Genome variation profiling by high throughput sequencing	Mus musculus	76		BED BEDPE TXT	Yaqiang Cao	Mar 01, 2024
GSE263567	Brd4::Nutm1 fusion gene initiates NUT carcinoma in vivo [WGS]	Genome variation profiling by high throughput sequencing	Mus musculus	4		VCF	Bin Gu	May 07, 2024