GEO Browser - GEO

Series

Samples

Platforms

DataSets

340 series

Export

Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Genome variation profiling by high throughput sequencing
GSE16344	Expression in Aneuploid Drosophila S2 Cells	Expression profiling by array Expression profiling by high throughput sequencing Genome binding/occupancy profiling by array Genome variation profiling by high throughput sequencing	Drosophila melanogaster	38	FTR GPR TXT SRA Run Selector	Brian Oliver	Jan 11, 2010
GSE18679	TimEX from human embryonic stem cells, mesenchymal stem cells, and erythroid cells	Expression profiling by array Genome variation profiling by genome tiling array Genome variation profiling by high throughput sequencing	Homo sapiens	27	CEL PAIR TXT SRA Run Selector	Eric Bouhassira	Nov 04, 2009
GSE31407	Drosophila DrosDel deficiency and diploid control flies	Expression profiling by array Expression profiling by high throughput sequencing Genome variation profiling by high throughput sequencing	Drosophila melanogaster	203	BAM PAIR SAM	Brian Oliver	Apr 03, 2012
GSE36846	Selection of epigenetic variation in Arabidopsis	Expression profiling by array Genome variation profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Arabidopsis thaliana	33	CEL TXT	Christian Heichinger	Sep 01, 2014
GSE38915	Correlation between DNase I hypersensitive site distribution and gene expression in HeLa S3 cells	Expression profiling by array Genome variation profiling by high throughput sequencing	Homo sapiens	2	TXT WIG	Yu-Xiang Zhang	Jun 19, 2015
GSE108010	CYTOGENETIC AND TRANSCRIPTOME PROFILING ANALYSIS OF MATCHED IN SITU/INVASIVE CUTANEOUS SQUAMOUS CELL CARCINOMAS FROM IMMUNOCOMPETENT PATIENTS	Expression profiling by array Genome variation profiling by SNP array Genome variation profiling by high throughput sequencing	Homo sapiens	70	CEL CYCHP	Júlia Perera-Bel	Jan 03, 2019
GSE114801	Trancriptomic and epigenetic analyses of mouse organoids expressing BrafV600E mutation	Expression profiling by array Genome variation profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	41	TXT	hari easwaran	Jan 01, 2019
GSE165169	SCID mT3-2D KPC Tumors and mT3-2D cell lines	Expression profiling by array Expression profiling by high throughput sequencing Genome variation profiling by high throughput sequencing	Mus musculus	26	RCC	Elana Judith Fertig	Feb 26, 2021
GSE26757	Using RNA-Seq for gene identification, polymorphism detection and transcript profiling in two alfalfa genotypes with divergent cell wall composition in stems	Expression profiling by high throughput sequencing Genome variation profiling by high throughput sequencing Other	Medicago sativa	6	FASTA TXT SRA Run Selector	Sam Yang	Apr 21, 2011
GSE27994	Expressed sequences and polymorphisms in rohu carp (Labeo rohita, Hamilton) revealed by mRNA-seq	Expression profiling by high throughput sequencing Genome variation profiling by high throughput sequencing Other	Labeo rohita	2	BAM FASTA	Matthew Baranski	Jan 01, 2013
GSE28211	Quantification of allele-specific expression patterns in Arabidopsis by tag profiling	Expression profiling by high throughput sequencing Genome variation profiling by high throughput sequencing	Arabidopsis lyrata Arabidopsis thaliana Arabidopsis thaliana x Arabidopsis lyrata	3	FA TXT	Marnik Vuylsteke	Mar 28, 2014
GSE29184	A draft map of cis-regulatory sequences in the mouse genome	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Genome variation profiling by high throughput sequencing	Mus musculus	143	BAM BIGWIG BOWTIE TXT	Bing Ren	Jul 01, 2012
GSE38286	DNA methyltransferases are required to induce heterochromatic re-replication in Arabidopsis.	Expression profiling by high throughput sequencing Genome variation profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Arabidopsis thaliana	43	TXT SRA Run Selector	Hume Stroud	Aug 07, 2012
GSE38685	Normal and Cancerous Prostate Cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Genome variation profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens	12	BW	Aaron Statham	Oct 16, 2012
GSE41729	Transcriptional silencing of transposable elements by Piwi and its impact on chromatin and gene expression	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Genome variation profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Drosophila melanogaster	32	BED BW SRA Run Selector	Grzegorz Sienski	Nov 26, 2012
GSE54199	Transcriptome and marker frequency analysis of E. coli (control vs. Trimethoprim) and S. pneumoniae (control vs. HPUra/Kanamycin)	Expression profiling by high throughput sequencing Genome variation profiling by high throughput sequencing	Escherichia coli Streptococcus pneumoniae	18	TXT SRA Run Selector	Jelle Slager	Apr 10, 2014
GSE57233	The Prion Protein (PrP) is involved in translation via RNA granule-like mRNPs, a connection which is impaired during neurodegenerative diseases	Expression profiling by high throughput sequencing Genome variation profiling by high throughput sequencing	Mus musculus	16	TXT XLS SRA Run Selector	Clemens Krost	Nov 01, 2015
GSE62952	Integrated genome and transcriptome sequencing from the same cell	Expression profiling by high throughput sequencing Genome variation profiling by high throughput sequencing	Homo sapiens Mus musculus	20	CSV TXT SRA Run Selector	Lennart Kester	Dec 11, 2014
GSE63420	Massive parallel sequencing uncovers actionable FGFR2-PPHLN1 fusion and ARAF mutations in intrahepatic cholangiocarcinoma	Expression profiling by high throughput sequencing Genome variation profiling by high throughput sequencing	Homo sapiens	30	SRA Run Selector	Daniela Sia	Jan 22, 2015
GSE65763	Correction of human phospholamban R14del mutation associated with cardiomyopathy using targeted nucleases and combination therapy	Expression profiling by high throughput sequencing Genome variation profiling by high throughput sequencing	Homo sapiens	6		FRANCESCA STILLITANO	Feb 09, 2015