GEO Browser - GEO

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59 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Expression profiling by array			SRA Run Selector
GSE10437	Dynamic regulation of nucleosome positioning in the human genome	Expression profiling by array	Homo sapiens	4	CEL CHP SRA Run Selector	Dustin E Schones	Feb 09, 2008
GSE11892	A Global View of Gene Activity and Alternative Splicing by Deep Sequencing of the Human Transcriptome	Expression profiling by array Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	11	TXT SRA Run Selector	Marc Sultan	Jul 03, 2008
GSE12889	CTCF demarcates chromatin domains	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	7	BED CEL TXT SRA Run Selector	Raja Jothi	Oct 20, 2008
GSE13622	The DNA-Encoded Nucleosome Organization of a Eukaryotic Genome	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by array	Homo sapiens Mus musculus Saccharomyces cerevisiae synthetic construct	8	TAB TXT SRA Run Selector	Desiree Tillo	Dec 18, 2008
GSE12646	Chromatin Signatures in Multipotent Human HSCs Indicate the Fate of Bivalent Genes during Differentiation	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by array	Homo sapiens	24	BED CEL CHP TXT SRA Run Selector	Chongzhi Zang	Jan 09, 2009
GSE14344	esBAF is an essential component of the core pluripotency transcriptional network	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	8	BED CEL TXT SRA Run Selector	Raja Jothi	Jan 20, 2009
GSE14782	Mycobacterium marinum chronic infection of adult zebrafish	Expression profiling by array Expression profiling by high throughput sequencing	Danio rerio	8	XML SRA Run Selector	Anna Magdalena Zakrzewska	Jun 30, 2009
GSE17312	BI Human Reference Epigenome Mapping Project	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by array	Homo sapiens	633	BAM BED CEL WIG SRA Run Selector	BROAD INSTITUTE	Aug 05, 2009
GSE15735	Genome-wide mapping of HATs and HDACs in human CD4+ T cells	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by array	Homo sapiens	41	BED CEL CHP TXT XLS ZIP SRA Run Selector	Chongzhi Zang	Aug 20, 2009
GSE18679	TimEX from human embryonic stem cells, mesenchymal stem cells, and erythroid cells	Genome variation profiling by genome tiling array Genome variation profiling by high throughput sequencing Expression profiling by array	Homo sapiens	27	CEL PAIR TXT SRA Run Selector	Eric Bouhassira	Nov 04, 2009
GSE16136	Regulation of Gene Expression and Parent-of-Origin Effects in Maize Hybrids	Expression profiling by array Expression profiling by high throughput sequencing	Zea mays	533	TXT SRA Run Selector	Patrick S. Schnable	Nov 20, 2009
GSE18927	University of Washington Human Reference Epigenome Mapping Project	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by array Expression profiling by high throughput sequencing	Homo sapiens	758	BAM BED CEL TXT WIG SRA Run Selector	Northwest REMC	Jan 06, 2010
GSE19198	Analysis of interleukin-21-induced Prdm1 gene regulation reveals functional cooperation of STAT3 and IRF4 TFs	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	56	CEL SRA Run Selector	Warren J Leonard	Jan 08, 2010
GSE16344	Expression in Aneuploid Drosophila S2 Cells	Genome variation profiling by high throughput sequencing Expression profiling by high throughput sequencing Genome binding/occupancy profiling by array Expression profiling by array	Drosophila melanogaster	38	FTR GPR TXT SRA Run Selector	Brian Oliver	Jan 11, 2010
GSE20136	Genome-wide nucleosome occupancy profiling by high throughput sequencing, and microarray analysis of RNA abundance	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by array	Caenorhabditis elegans	12	CALLS PAIR WIG SRA Run Selector	Jason D Lieb	Mar 02, 2010
GSE20076	BRD7 is a candidate tumour suppressor gene required for p53 function	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	8	TXT SRA Run Selector	Jarno Drost	Mar 14, 2010
GSE21068	Estrogen-mediated Epigenetic Repression of Large Chromosomal Regions through DNA Looping	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by genome tiling array Expression profiling by array	Homo sapiens Rattus norvegicus	12	GFF PAIR TXT WIG SRA Run Selector	Pei-Yin Hsu	Apr 29, 2010
GSE17067	A quantitative model of transcription regulation reveals the role of non-conserved enhancers	Expression profiling by array Genome binding/occupancy profiling by genome tiling array Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	28	BED CEL GPR TXT SRA Run Selector	Kenzie MacIsaac	May 13, 2010
GSE15519	Expression and ChIP-seq analyses of embryonic stem cells, extraembryonic endoderm stem cells, and trophoblast stem cells	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	16	CEL CHP WIG SRA Run Selector	Brian Joseph Cox	May 17, 2010
GSE21512	Simple combinations of lineage-determining transcription factors prime cis-regulatory elements required for macrophage and B cell identities	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	52	BED FA TXT SRA Run Selector	Christopher Benner	May 27, 2010