GEO Browser - GEO

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403 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Expression profiling by array			BED
GSE12889	CTCF demarcates chromatin domains	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	7	BED CEL TXT SRA Run Selector	Raja Jothi	Oct 20, 2008
GSE12363	H3K79 methylation profiles define murine and human MLL-AF4 leukemias	Expression profiling by array Genome binding/occupancy profiling by genome tiling array	Homo sapiens Mus musculus	49	BAR BED CEL	Madeleine E. Lemieux	Nov 04, 2008
GSE12646	Chromatin Signatures in Multipotent Human HSCs Indicate the Fate of Bivalent Genes during Differentiation	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by array	Homo sapiens	24	BED CEL CHP TXT SRA Run Selector	Chongzhi Zang	Jan 09, 2009
GSE14344	esBAF is an essential component of the core pluripotency transcriptional network	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	8	BED CEL TXT SRA Run Selector	Raja Jothi	Jan 20, 2009
GSE15220	Genome-wide analysis of differential methylation and gene expression in a testicular cancer cell line	Expression profiling by array Methylation profiling by genome tiling array	Homo sapiens	13	BAR BED CEL CHP	Hoi Hung Cheung	Mar 18, 2009
GSE15805	Duke-UNC-Texas-EBI ENCODE expression project	Expression profiling by array	Homo sapiens	155	BED CEL	Sridar V Chittur	Apr 23, 2009
GSE15909	Gene expression and UH2A ChIP-Seq binding analysis in Bmi1 knock-out and wild type MEFs	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	4	BED CEL CHP TXT	Raja Jothi	May 20, 2009
GSE13279	Defining the chromatin signature of inducible genes in T cells	Expression profiling by array Genome binding/occupancy profiling by genome tiling array	Mus musculus	21	BAR BED CEL	Kristine Hardy	Jun 01, 2009
GSE15726	Chromosomal duplication in the grandifolia-D mutants of Arabidopsis thaliana	Expression profiling by array Genome variation profiling by genome tiling array	Arabidopsis thaliana	13	BAR BED CEL	Nathalie Gonzalez	Jun 02, 2009
GSE17312	BI Human Reference Epigenome Mapping Project	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by array	Homo sapiens	633	BAM BED CEL WIG SRA Run Selector	BROAD INSTITUTE	Aug 05, 2009
GSE15735	Genome-wide mapping of HATs and HDACs in human CD4+ T cells	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by array	Homo sapiens	41	BED CEL CHP TXT XLS ZIP SRA Run Selector	Chongzhi Zang	Aug 20, 2009
GSE18505	HepG2 hepatoma and U87 glioma cells: transcriptomic and genomic analyses	Expression profiling by array Genome binding/occupancy profiling by genome tiling array	Homo sapiens	41	BAR BED CEL	Xiaobo Xia	Oct 09, 2009
GSE19090	Exon arrays of ENCODE tier 1, tier 2 and tier 3 cell types	Expression profiling by array	Homo sapiens	182	BED BROADPEAK CEL	ENCODE DCC	Nov 19, 2009
GSE18829	Discovering Hematopoietic Mechanisms Through Genome-Wide Analysis of GATA Factor Chromatin Occupancy	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by array	Homo sapiens Mus musculus	11	BED TXT	Emery H. Bresnick	Nov 25, 2009
GSE19203	PML-RARa binding sites and their correlation with the gene expression in ATRA treated NB4 cells	Genome binding/occupancy profiling by genome tiling array Expression profiling by array	Homo sapiens	7	BAR BED CEL TXT	Jiantao Shi	Nov 26, 2009
GSE18132	Dynamic O-GlcNAc cycling at promoters of C. elegans genes regulating Longevity, Stress, and Immunity	Expression profiling by array Genome binding/occupancy profiling by genome tiling array Other	Caenorhabditis elegans	72	BAR BED CEL CHP	Michael Krause	Jan 01, 2010
GSE18927	University of Washington Human Reference Epigenome Mapping Project	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by array Expression profiling by high throughput sequencing	Homo sapiens	758	BAM BED CEL TXT WIG SRA Run Selector	Northwest REMC	Jan 06, 2010
GSE19899	Dissecting the unique role of the retinoblastoma tumor suppressor during cellular senescence	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	50	BED CEL	Agustin Chicas	Jan 15, 2010
GSE21200	OCT4, NANOG and CTCF in human embryonic stem cells	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by array	Homo sapiens	17	BED TXT	Justin Jeyakani Joseph Gnanakkan	Apr 05, 2010
GSE20753	PHF8 targets histone methylation and RNA polymerase II to activate transcription	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	16	BED TXT WIG	Klaus Fortschegger	Apr 27, 2010