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953 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter			Homo sapiens		TAR
GSE186158	Single-cell transcriptomic atlas reveals the evolution of immune cells and molecules across multiple vertebrate species	Expression profiling by high throughput sequencing	Xenopus tropicalis Sus scrofa Rattus norvegicus Mus musculus Macaca mulatta Homo sapiens Danio rerio	7	TAR SRA Run Selector	Cangang Zhang	Jan 30, 2023
GSE133361	Determination of isoform-specific RNA structure with nanopore long reads	Other	Tetrahymena thermophila Saccharomyces cerevisiae Oceanobacillus iheyensis Homo sapiens Dengue virus Bacillus subtilis	21	CSV TAR TXT XLSX SRA Run Selector	Aw Jong Ghut Ashley	Sep 09, 2020
GSE81026	Cis Regulatory Element Scan by Tiling-deletion and Sequencing	Other Genome binding/occupancy profiling by high throughput sequencing	synthetic construct Homo sapiens	23	BED BW PDF TAR SRA Run Selector	Bing Ren	Apr 17, 2017
GSE160457	An all-to-all approach to the identification of sequence-specific readers for epigenetic DNA modifications on cytosine	Other Methylation profiling by high throughput sequencing	synthetic construct Homo sapiens	20	TAR XLS SRA Run Selector	Heng Zhu	Dec 01, 2020
GSE198281	Proliferative Receptor Binding Domain (RBD)-specific CD4+ T cells correlate with neutralizing antibody levels after natural SARS-CoV-2 infection and are induced following vaccination	Expression profiling by high throughput sequencing	synthetic construct Homo sapiens	6	CSV RDATA TAR	Peter Croucher	Jan 24, 2024
GSE207360	Mesenchymal glioma stem cells trigger vasectasia, a distinct neovascularization process mediated by extracellular vesicles carrying EGFR [scRNA-seq]	Expression profiling by high throughput sequencing Other	synthetic construct Mus musculus Homo sapiens	45	DCC PKC RDS TAR XLSX	Janusz Rak	Mar 04, 2024
GSE251926	Open-ST: High-resolution spatial transcriptomics in 3D	Other	synthetic construct Mus musculus Homo sapiens	27	CSV H5AD TAR	Daniel León-Perinán	Jun 23, 2024
GSE282714	SPARROW reveals microenvironment zone-specific cell states in healthy and diseased tissues.	Other	synthetic construct Homo sapiens	6	CSV TAR	Peiyao A Zhao	Nov 24, 2024
GSE87776	VRTN Regulates the Number of Thoracic Vertebrae During Vertebrate Development	Expression profiling by high throughput sequencing Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing	Sus scrofa Homo sapiens	13	CEL TAR TXT	Yanyu Dean	Oct 09, 2019
GSE181483	Therapeutic landscape of targeting epigenetically reprogrammed vascular adaptome in the fibrotic liver of multiple species	Expression profiling by high throughput sequencing	Sus scrofa Homo sapiens	9	MTX TAR TSV TXT SRA Run Selector	Bi-Sen Ding	Oct 12, 2021
GSE219158	Mechanotransduction inhibition prevents scarring and yields regeneration in a large animal model	Expression profiling by high throughput sequencing	Sus scrofa Homo sapiens	13	MTX TAR TSV	Michael Januszyk	Jan 08, 2025
GSE248949	Cellular Heterogeneity of Pluripotent Stem Cell Derived Cardiomyocyte Grafts is Mechanistically Linked to Treatable Arrhythmias [Spatial Transcriptomics]	Other	Sus scrofa Homo sapiens	2	TAR	Onkar Rajesh Mulay	Dec 14, 2023
GSE248953	Cellular Heterogeneity of Pluripotent Stem Cell Derived Cardiomyocyte Grafts is Mechanistically Linked to Treatable Arrhythmias	Other Expression profiling by high throughput sequencing	Sus scrofa Homo sapiens	4	TAR	Onkar Rajesh Mulay	Dec 14, 2023
GSE63330	DNA methylation in mammalian placentas	Methylation profiling by high throughput sequencing	Saimiri boliviensis Mus musculus Monodelphis domestica Macaca mulatta Homo sapiens Equus caballus Canis lupus familiaris Bos taurus	20	TAR SRA Run Selector	Janine LaSalle	Aug 05, 2015
GSE202339	CITED2 is a conserved regulator of deep placentation	Expression profiling by high throughput sequencing	Rattus norvegicus Rattus Homo sapiens	26	TAR	Khursheed Iqbal	May 18, 2023
GSE106245	Human embryonic stem cell, chimpanzee induced pluripotent stem cell, orangutan induced pluripotent stem cell, rhesus embryonic stem cell, and their derived cortical organoid RNA-seq	Expression profiling by high throughput sequencing	Pongo abelii Pan troglodytes Macaca mulatta Homo sapiens	55	GTF TAR TSV TXT SRA Run Selector	Andrew Ryan Field	May 31, 2018
GSE164092	Molecular profiling of stem cell-derived retinal pigment epithelial cell differentiation established for clinical translation	Expression profiling by high throughput sequencing	Oryctolagus cuniculus Homo sapiens	24	H5AD LOOM TAR SRA Run Selector	Gioele La Manno	Feb 04, 2021
GSE80105	Synergistic model of chromatin predicts Dnase-I accessibility	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus Homo sapiens	8	TAR TSV TXT SRA Run Selector	David Gifford	Jul 20, 2016
GSE80156	A coding sequence-embedded principle governs translational reading frame fidelity	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Mus musculus Homo sapiens	7	TAR WIG SRA Run Selector	Ji Wan	Apr 12, 2016
GSE97179	Single Cell Methylome Signatures Reveal Distinct Neuronal Populations and Regulatory Elements in the Mammalian Cortex	Methylation profiling by high throughput sequencing Other	Mus musculus Homo sapiens	6172	TAR SRA Run Selector	Joseph R Ecker	Aug 10, 2017