GEO Browser - GEO

Series

Samples

Platforms

DataSets

36 series

Export

Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL19057		Homo sapiens		BIGWIG
GSE60604	An alternative pluripotent state confers interspecies chimaeric competency [ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	12	BIGWIG SRA Run Selector	Christopher Benner	May 06, 2015
GSE60605	An alternative pluripotent state confers interspecies chimaeric competency	Expression profiling by array Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens Macaca mulatta Mus musculus Pan troglodytes	42	BIGWIG CEL TSV	Christopher Benner	May 06, 2015
GSE85164	DHX9 suppresses spurious RNA processing defects originating from the Alu invasion of the human genome	Expression profiling by high throughput sequencing Other	Drosophila melanogaster Homo sapiens Mus musculus	90	BED BIGWIG	Asifa Akhtar	Mar 28, 2017
GSE94804	Genome-wide maps of chromatin state in neurosphere cells and breast cancer cells	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	40	BIGWIG SRA Run Selector	Mark A Zarnegar	Feb 23, 2017
GSE99284	Enhancer reprogramming promotes pancreatic cancer progression and metastasis [ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	90	BIGWIG SRA Run Selector	Jae Seok Roe	Jul 31, 2017
GSE99311	Enhancer reprogramming promotes pancreatic cancer progression and metastasis	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	136	BIGWIG TXT	Jae Seok Roe	Jul 31, 2017
GSE100400	Episomal HBV persistence within transcribed host nuclear chromatin compartments involves HBx	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	31	BIGWIG SRA Run Selector	Jan Postberg	Apr 30, 2018
GSE100647	Che-1/AATF sustains cell growth and global transcription in Multiple Myeloma through the maintenance of open chromatin structure	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	30	BIGWIG BW	Matteo Pallocca	Jun 07, 2021
GSE110061	Direct DNA crosslinking with CAP-C uncovers transcription-dependent chromatin organization at high resolution	Genome binding/occupancy profiling by high throughput sequencing Other	Drosophila melanogaster Homo sapiens Mus musculus	76	BIGWIG HIC NARROWPEAK TXT SRA Run Selector	Youzhi Cheng	Aug 22, 2020
GSE112417	Histone Variant H2A.Z Defines Cell Identity in Vascular Smooth Muscle Cells as Revealed by Single-Cell Transcriptomics	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	52	BIGWIG CSV TXT SRA Run Selector	Li Wang	Jun 08, 2018
GSE115463	TP63-mediated enhancer reprogramming drives the squamous subtype of pancreatic ductal adenocarcinoma	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	92	BIGWIG	Tim D D Somerville	Nov 13, 2018
GSE124190	PLZF limits enhancer activity during hematopoietic progenitor aging	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	41	BIGWIG BW TXT SRA Run Selector	Mathilde Poplineau	Dec 21, 2018
GSE134125	The RNA hairpin binder TRIM71 modulates alternative splicing by repressing MBNL1	Expression profiling by high throughput sequencing Other	Homo sapiens Mus musculus	76	BIGWIG TSV	Panagiotis Papasaikas	Aug 01, 2019
GSE135498	Sequencing short capped RNAs captures acute transcription initiation and identifies promoter and distal regulatory elements across eukaryotes from total RNA	Other	Capsaspora owczarzaki Homo sapiens Mus musculus Nematostella vectensis Neurospora crassa Oryza sativa	40	BIGWIG BW TXT SRA Run Selector	Christopher Benner	Sep 16, 2019
GSE137925	Global Profiling of RNA-Binding Protein Target Sites by LACE-seq	Other Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	55	BIGWIG BW TXT SRA Run Selector	Yuanchao Xue	Apr 25, 2021
GSE138460	An androgen receptor switch underlies lineage infidelity to drive neuroendocrine prostate cancer	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	41	BIGWIG BW TXT	Amina Zoubeidi	Jul 15, 2021
GSE139420	In situ capture of global transcription dynamics and enhancer activity with high accuracy and sensitivity	Expression profiling by high throughput sequencing Other Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	78	BED BIGWIG XLS SRA Run Selector	Ruitu Lyu	Feb 15, 2020
GSE154675	PHF6 Interacts with LMO2 During Normal Haematopoiesis and in Leukaemia and Regulates the Level of Gene Expression and Genome Integrity	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	41	BIGWIG TXT SRA Run Selector	Maarten Hoogenkamp	Dec 31, 2024
GSE163142	Retinoic Acid Signaling Drives Differentiation towards Enterocytes in Colorectal Cancer	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	58	BIGWIG CSV TXT SRA Run Selector	Michiel Vermeulen	Nov 26, 2021
GSE165023	Sstr2 knockout mice	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus	52	BIGWIG BW MTX TSV	Byoung-Ha Yoon	Jan 04, 2023