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592 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter			Drosophila melanogaster		BW
GSE144244	m6A RNA methylation regulates promoter proximal pausing of RNA Pol II (ChIP-Seq)	Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster	44	BAM BW SRA Run Selector	Junaid Akhtar	Jul 28, 2021
GSE77429	Organ-specific gene expression in single differentiating Drosophila embryos	Expression profiling by high throughput sequencing	Drosophila melanogaster	24	BB BW SRA Run Selector	David Molnar	Feb 01, 2017
GSE131160	BEN-solo factors partition active chromatin to ensure proper gene activation in Drosophila	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Drosophila melanogaster	59	BB BW XLSX SRA Run Selector	Jiayu Wen	Nov 04, 2019
GSE36212	Promoter activity profiling throughout the Drosophila life cycle reveals role of transposons in regulatory innovation	Expression profiling by high throughput sequencing	Drosophila melanogaster	36	BED BW TXT SRA Run Selector	Philippe Batut	Aug 30, 2012
GSE36213	Profiling of transcription start site expression in Drosophila and the human K562 cell line using RAMPAGE	Expression profiling by high throughput sequencing	Drosophila melanogaster Homo sapiens	37	BED BW	Philippe Batut	Aug 29, 2012
GSE36404	Generation of chromatin maps for ASH1 and FSH applying ChIP-seq	Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster	4	BED BW SRA Run Selector	Tobias Kockmann	Feb 06, 2013
GSE41729	Transcriptional silencing of transposable elements by Piwi and its impact on chromatin and gene expression	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Genome variation profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Drosophila melanogaster	32	BED BW SRA Run Selector	Grzegorz Sienski	Nov 26, 2012
GSE49899	Diverse patterns of genome-wide DNA targeting by transcriptional regulators in Drosophila melanogaster	Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster	47	BED BW SRA Run Selector	Kevin P. White	Aug 16, 2013
GSE53020	Domain ChIRP reveals the modularity of long noncoding RNA architecture, function, and target genes	Other	Drosophila melanogaster	12	BED BW SRA Run Selector	Kun Qu	Jun 16, 2014
GSE58821	High-Affinity Sites Form an Interaction Network to Facilitate Spreading of the MSL Complex across the X Chromosome in Drosophila	Other Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster	100	BED BIGWIG BW TXT SRA Run Selector	Fidel Ramirez	Oct 01, 2015
GSE59078	Discovery of Transcription Factors and Regulatory Regions Driving In Vivo Tumor Development by ATAC-seq and FAIRE-seq Open Chromatin Profiling	Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster	13	BED BW TXT SRA Run Selector	Kristofer Davie	Feb 13, 2015
GSE59924	A Novel Role of Polycomb in Positive Transcription Regulation by Modulating H4K20me1	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Drosophila melanogaster	4	BED BW TXT SRA Run Selector	Gang Wei	Apr 12, 2016
GSE69208	roX ChIRP-seq in four Drosophila species	Genome binding/occupancy profiling by high throughput sequencing	Drosophila busckii Drosophila melanogaster Drosophila virilis Drosophila willistoni	35	BED BEDGRAPH BW FA RTF XLSX SRA Run Selector	Kun Qu	Jan 25, 2016
GSE80457	Chromatin remodeling during in vivo neural stem cells differentiating to neurons in early Drosophila embryos [ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster	12	BED BW TXT SRA Run Selector	Youqiong Ye	Nov 20, 2016
GSE80458	Chromatin remodeling during in vivo neural stem cells differentiating to neurons in early Drosophila embryos	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster	14	BED BW TXT	Youqiong Ye	Nov 20, 2016
GSE83376	Dynamic regulation of chromatin signatures during Drosophila embryonic glial differentiation [ChIP-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster	12	BED BW SRA Run Selector	Youqiong Ye	Nov 20, 2016
GSE83377	Dynamic regulation of chromatin signatures during Drosophila embryonic glial differentiation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster	14	BED BW	Youqiong Ye	Nov 20, 2016
GSE86106	The Drosophila speciation factor HMR localizes to genomic insulator sites	Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster	29	BED BW SRA Run Selector	Axel Imhof	Jan 31, 2017
GSE87792	A mutually exclusive stem loop arrangement in roX2 RNA is essential for X chromosome regulation in Drosophila	Expression profiling by high throughput sequencing	Drosophila melanogaster	12	BED BIGWIG BW GFF NARROWPEAK SRA Run Selector	Asifa Akhtar	Oct 01, 2017
GSE89299	Drosophila melanogaster embryonic development RAMPAGE time series (Biological replicate #2)	Expression profiling by high throughput sequencing	Drosophila melanogaster	23	BED BW TXT SRA Run Selector	Philippe Batut	Dec 19, 2017