GEO Browser - GEO

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1165 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter			Drosophila melanogaster		BED
GSE228170	4C-Seq Drosophila Imaginal Disc HP6/Umbrea	Other	Drosophila melanogaster	1	BED	UnJin Lee	Jul 16, 2024
GSE118013	4C-seq characterization of Drosophila BEAF binding regions provides evidence for highly variable long-distance interactions between active chromatin	Other	Drosophila melanogaster	8	BED SRA Run Selector	Craig M. Hart	Aug 02, 2018
GSE86795	6mA-DNA-binding factor Jumu controls maternal-to-zygotic transition upstream of Zelda	Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Drosophila melanogaster	40	BED TXT SRA Run Selector	Shunmin He	Apr 18, 2019
GSE199801	A CpG island-encoded mechanism protects genes from premature transcription termination [SET1_ChIPseq]	Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster Homo sapiens Mus musculus	60	BED BW CSV	Emilia Dimitrova	Dec 22, 2022
GSE59924	A Novel Role of Polycomb in Positive Transcription Regulation by Modulating H4K20me1	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Drosophila melanogaster	4	BED BW TXT SRA Run Selector	Gang Wei	Apr 12, 2016
GSE124785	A chemical genetic method for monitoring genome-wide dynamics of O-GlcNAc turnover on chromatin-associated proteins.	Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster	38	BED BEDGRAPH SRA Run Selector	David Vocadlo	Jan 07, 2020
GSE38727	A common set of DNA regulatory elements shapes Drosophila appendages	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Drosophila melanogaster	22	BED TXT WIG XLS SRA Run Selector	Daniel J McKay	Nov 07, 2013
GSE272579	A developmental mechanism to Regulate Alternative Polyadenylation in an Adult Stem Cell Lineage [3'seq_KDs]	Expression profiling by high throughput sequencing	Drosophila melanogaster	18	BED TXT	Lorenzo Gallicchio	Jul 22, 2024
GSE272580	A developmental mechanism to Regulate Alternative Polyadenylation in an Adult Stem Cell Lineage [3'seq_OEs]	Expression profiling by high throughput sequencing	Drosophila melanogaster	8	BED TXT	Lorenzo Gallicchio	Jul 22, 2024
GSE247156	A dual histone code specifies the binding of heterochromatin protein Rhino to a subset of piRNA source loci	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Drosophila ananassae Drosophila erecta Drosophila melanogaster Drosophila simulans Drosophila yakuba	138	BED BROADPEAK BW NARROWPEAK	Susanne Bornelöv	Apr 18, 2025
GSE247151	A dual histone code specifies the binding of heterochromatin protein Rhino to a subset of piRNA source loci [CUT&RUN chromodomains in S2 cells]	Genome binding/occupancy profiling by high throughput sequencing Other	Drosophila melanogaster	35	BED BROADPEAK BW NARROWPEAK	Susanne Bornelöv	Apr 18, 2025
GSE247152	A dual histone code specifies the binding of heterochromatin protein Rhino to a subset of piRNA source loci [CUT&RUN histone modifications in S2 cells]	Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster	25	BED BROADPEAK BW NARROWPEAK	Susanne Bornelöv	Apr 18, 2025
GSE46009	A genome-wide RNAi screen draws a genetic framework for transposon control and primary piRNA biogenesis in Drosophila	Genome binding/occupancy profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing Expression profiling by high throughput sequencing	Drosophila melanogaster	37	BED TXT SRA Run Selector	Felix Muerdter	May 09, 2013
GSE193224	A giant virus genome is densely packaged by stable nucleosomes	Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster Marseillevirus marseillevirus synthetic construct	117	BED BEDGRAPH BIGWIG FASTA PDF	Jorja Henikoff	Sep 27, 2022
GSE41703	A global change in RNA Polymerase II pausing during the Drosophila midblastula transition	Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster	26	BED	Julia Zeitlinger	Jul 25, 2013
GSE41700	A global change in RNA Polymerase II pausing during the Drosophila midblastula transition [ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster	25	BED SRA Run Selector	Julia Zeitlinger	Jul 26, 2013
GSE41686	A global change in RNA Polymerase II pausing during the Drosophila midblastula transition [MNase-seq]	Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster	1	BED SRA Run Selector	Julia Zeitlinger	Jul 26, 2013
GSE87792	A mutually exclusive stem loop arrangement in roX2 RNA is essential for X chromosome regulation in Drosophila	Expression profiling by high throughput sequencing	Drosophila melanogaster	12	BED BIGWIG BW GFF NARROWPEAK SRA Run Selector	Asifa Akhtar	Oct 01, 2017
GSE293864	A second genetic screen for gurken mRNA mislocalisation reveals novel phenotypes of the piRNA pathway mutants in Drosophila [ncRNA-seq]	Non-coding RNA profiling by high throughput sequencing	Drosophila melanogaster	6	BED	Rippei Hayashi	Apr 14, 2025
GSE67454	A simple method for generating high-resolution maps of genome wide protein binding	Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster Homo sapiens Mus musculus	5	BED WIG SRA Run Selector	Jorja Henikoff	Jun 12, 2015