GEO Browser - GEO

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46 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter			Tetrahymena thermophila		TXT
GSE104699	N6-methyldeoxyadenosine directs nucleosome positioning in Tetrahymena DNA	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Tetrahymena thermophila	26	BED TXT SRA Run Selector	Guan-Zheng Luo	Oct 17, 2018
GSE210901	Multilevel interrogation of H3.3 dynamics reveals a primordial role in transcription regulation in Tetrahymena [ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Tetrahymena thermophila	4	BW TXT	Jeffrey Fillingham	Apr 03, 2023
GSE133361	Determination of isoform-specific RNA structure with nanopore long reads	Other	Bacillus subtilis Dengue virus Homo sapiens Oceanobacillus iheyensis Saccharomyces cerevisiae Tetrahymena thermophila	21	CSV TAR TXT XLSX SRA Run Selector	Aw Jong Ghut Ashley	Sep 09, 2020
GSE243435	EMA2 is required for target-directed scnRNA degradation.	Non-coding RNA profiling by high throughput sequencing	Tetrahymena thermophila	4	FASTA TXT	Kazufumi Mochizuki	Sep 18, 2023
GSE94421	Genome-wide analysis of chromatin and transcription in the ciliates Oxytricha trifallax and Tetrahymena thermophila	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Oxytricha trifallax Tetrahymena thermophila	77	GFF TXT SRA Run Selector	Leslie Beh	May 16, 2019
GSE125628	Distinct 3D Genome Organization in the Two Nuclei of Tetrahymena thermophila	Other	Tetrahymena thermophila	18	HIC TXT SRA Run Selector	xiaoyuan song	Oct 01, 2020
GSE11300	Genome-Wide Microarray Analysis Reveals Massive Changes in Gene Expression During Conjugation in Tetrahymena thermophila	Expression profiling by array	Tetrahymena thermophila	50	TXT	Martin Gorovsky	Oct 01, 2008
GSE18743	Genome-Wide Microarray Analysis of Histone H2B Ubiquitylation mutant strains of Tetrahymena thermophila	Expression profiling by array	Tetrahymena thermophila	6	TXT	Martin Gorovsky	Oct 27, 2009
GSE26385	Genome-Wide Microarray Analysis of Gene Expression During Starvation in Tetrahymena thermophila	Expression profiling by array	Tetrahymena thermophila	4	TXT	Yifan Liu	Jun 13, 2011
GSE26650	Genome-Wide gene expression of Tetrahymena thermophila conjugation	Expression profiling by array	Tetrahymena thermophila	11	TXT	Ronald Pearlman	Jun 13, 2011
GSE27971	RNA-seq analysis of Tetrahymena thermophila	Expression profiling by high throughput sequencing	Tetrahymena thermophila	6	TXT SRA Run Selector	Wei Miao	Mar 15, 2012
GSE37696	Analysis of conjugation-specific 26-32nt siRNAs of Tetrahymena thermophila	Non-coding RNA profiling by high throughput sequencing	Tetrahymena thermophila	4	TXT SRA Run Selector	Kazufumi Mochizuki	Oct 01, 2012
GSE38507	A Tetrahymena Piwi Bound to Mature tRNA 3' Fragments Activates the Exonuclease Xrn2 for RNA Processing in the Nucleus	Non-coding RNA profiling by high throughput sequencing	Tetrahymena thermophila	1	TXT SRA Run Selector	Mary T Couvillion	Aug 31, 2012
GSE38768	Biased transcription and selective degradation of small RNAs shape the pattern of DNA elimination in Tetrahymena	Non-coding RNA profiling by high throughput sequencing Other	Tetrahymena thermophila	13	TXT SRA Run Selector	Kazufumi Mochizuki	Jun 21, 2012
GSE47650	Sequence analysis of scnRNAs	Non-coding RNA profiling by high throughput sequencing	Tetrahymena thermophila	4	TXT SRA Run Selector	Kazufumi Mochizuki	Jun 05, 2013
GSE61609	Twi1p-loaded scnRNAs in GIW1 KO Tetrahymena cells	Expression profiling by high throughput sequencing	Tetrahymena thermophila	2	TXT SRA Run Selector	Kazufumi Mochizuki	Sep 23, 2014
GSE64046	mRNA sequencing of WT, ∆EZL1 and ∆DCL1 cells in conjugation 3, 6 and 10 (C3, C6 anc C10) hours of Tetrahymena thermophila	Expression profiling by high throughput sequencing	Tetrahymena thermophila	9	TXT SRA Run Selector	Yifan lIU	Dec 31, 2016
GSE64049	Small RNA sequencing of WT, ∆EZL1 and ∆DCL1 cells in conjugation 3, 6 and 10 (C3, C6 anc C10) hours of Tetrahymena thermophila	Non-coding RNA profiling by high throughput sequencing	Tetrahymena thermophila	7	TXT SRA Run Selector	Yifan lIU	Dec 31, 2016
GSE64061	Nucleosome mapping of Tetrahymena thermophila chromatin in vivo and in vitro	Genome binding/occupancy profiling by high throughput sequencing	Tetrahymena thermophila	17	TXT SRA Run Selector	Leslie Beh	Jul 30, 2015
GSE68455	Analyses of Early- and Late-scnRNAs of Tetrahymena	Non-coding RNA profiling by high throughput sequencing	Tetrahymena thermophila	18	TXT SRA Run Selector	Kazufumi Mochizuki	Jun 15, 2015