48 series
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Accession Title Series type(s) Organism(s) Samples GDS Supplementary Contact Release date
Remove filtersFilter Remove filterEscherichia coli Remove filterTSV
GSE264631
Insights into the stress response of Escherichia coli biofilms upon Plasma-activated water treatment.
  • Link icon Escherichia coli
16
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M. Mozammel Hoque Mar 07, 2025
GSE271571
Decoding the Escherichia coli epitranscriptome
4 Kirsten Jung Feb 21, 2025
GSE104303
Chaperone saturation mediates translation and protein folding efficiency
30 Vincent J Hilser Oct 27, 2024
GSE247244
RNA secondary structure ensemble mapping in a living cell identifies conserved RNA regulatory switches and thermometers
19 Danny Incarnato Sep 24, 2024
GSE215798
Stress response in Escherichia coli following sublethal phenalene-1-one mediated antimicrobial photodynamic therapy: an RNA-Seq study
  • Link icon Escherichia coli
20
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Stefan Czemmel Sep 23, 2024
GSE254392
Engineering spacer specificity of the Cre/loxP system
  • Link icon Escherichia coli
24
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Maciej Paszkowski-Rogacz Jul 25, 2024
GSE255663
Plasmid-encoded insertion sequences promote rapid adaptation in clinical enterobacteria
55
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Alvaro San Millan Jul 16, 2024
GSE269852
Plasmid-chromosome transcriptional crosstalk in multidrug resistant clinical enterobacteria
78
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Alvaro San Millan Jul 16, 2024
GSE240651
A cell-free pipeline for recreating methylation patterns radically enhances DNA transformation in bacteria
7
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Chase Beisel Apr 07, 2024
GSE254843
Experimental tests strongly challenge the evidence of a healthy human blood microbiome
15 Matteo Ramazzotti Mar 01, 2024
GSE249103
A Whole-Cell Screening Platform for Discovering Cell Adhesion Molecules Enabling Programmable Bacterial Cell-Cell Adhesion
  • Link icon Escherichia coli
6
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See-Yeun Ting Dec 18, 2023
GSE211736
Joint epigenome profiling reveals cell-type-specific gene regulatory programs in human cortical organoids
27 Boyan Bonev Aug 23, 2023
GSE224605
5’-NAD-RNA identification in E. coli BW25113 wt, nudC and csdA knockouts
  • Link icon Escherichia coli
15
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Kotryna Kvederaviciute Aug 22, 2023
GSE224606
Whole transcriptome sequencing of E. coli BW25113 wt and nudC knockout strains
  • Link icon Escherichia coli
6
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Kotryna Kvederaviciute Aug 22, 2023
GSE224608
Interplay between bacterial RNA 5'-termini deNADding protein NudC and DEAD-box RNA helicase CsdA in stress-responses
  • Link icon Escherichia coli
21
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Kotryna Kvederaviciute Aug 22, 2023
GSE237136
Systematic interrogation of CRISPR-based antimicrobials in Klebsiella pneumoniae reveals nuclease-, guide-, and strain-specific factors influencing antimicrobial activity
20
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David Bikard Jul 17, 2023
GSE205240
Transcriptional profiling of extraintestinal Escherichia coli exposed to cranberry pomace extracts alone or in combination with ceftriaxone
  • Link icon Escherichia coli
12
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Dion Lepp Jun 01, 2023
GSE233667
Modifications in the T arm of tRNA globally determine tRNA function and cellular fitness
  • Link icon Escherichia coli
15
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Christopher Daniel Katanski May 31, 2023
GSE209901
RNA-DNA interactome of a prokaryotic cell uncovered by proximity ligation
6
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Grigory Evko Apr 07, 2023
GSE180237
Bacterial droplet-based single-cell RNA-seq reveals antibiotic-associated heterogeneous cellular states
35 Peijun Ma Jan 27, 2023