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4125 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter			Saccharomyces cerevisiae
GSE28298	Tripartite organization of centromeric chromatin in budding yeast	Genome binding/occupancy profiling by high throughput sequencing	Saccharomyces cerevisiae	28	BAM PDF SAM WIG	Jorja Henikoff	Dec 07, 2011
GSE29122	Sch9 regulates ribosome biogenesis via Stb3, Dot6 and Tod6 and the histone deacetylase complex RPD3L (mRNA-Seq data)	Expression profiling by high throughput sequencing	Saccharomyces cerevisiae	16	BAM SRA Run Selector	Jacques Rougemont	Jul 01, 2011
GSE29124	Sch9 regulates ribosome biogenesis via Stb3, Dot6 and Tod6 and the histone deacetylase complex RPD3L (ChIP-Seq data)	Genome binding/occupancy profiling by high throughput sequencing	Saccharomyces cerevisiae	9	BAM BIGWIG SRA Run Selector	Jacques Rougemont	Jul 01, 2011
GSE29125	Sch9 regulates ribosome biogenesis via Stb3, Dot6 and Tod6 and the histone deacetylase complex RPD3L	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Saccharomyces cerevisiae	25	BAM BIGWIG	Jacques Rougemont	Jul 01, 2011
GSE116337	Nucleosome position mapping by micrococcal nuclease analysis of S. cerevisiae cells in raffinose and galactose containing media	Genome binding/occupancy profiling by high throughput sequencing	Saccharomyces cerevisiae	8	BAM SRA Run Selector	Tineke Lenstra	May 14, 2019
GSE168700	A hexasome is the preferred substrate for the INO80 chromatin remodeling complex allowing versatility of function	Genome binding/occupancy profiling by high throughput sequencing	Saccharomyces cerevisiae	4	BAM SRA Run Selector	Vijay Ramani	Jan 01, 2022
GSE173534	ChIPseq experiments for chromatin modification in S.cerevisiae upon truncations of CTR9	Genome binding/occupancy profiling by high throughput sequencing	Saccharomyces cerevisiae	28	BAM SRA Run Selector	Stephen Buratowski	Apr 29, 2021
GSE189063	A transcriptional roadblock protects yeast centromeres	Expression profiling by high throughput sequencing	Saccharomyces cerevisiae	16	BAM BW TSV SRA Run Selector	Glennis Amelia Logsdon	Feb 07, 2022
GSE243114	A bioinformatic pipeline for analysis of M.EcoGII methylation footprint PacBio long-read sequence data	Other	Escherichia coli Saccharomyces cerevisiae	12	BAM BED BIGWIG	David J. Clark	Mar 15, 2024
GSE11800	Annotating Low Abundance and Transient RNAs in Yeast using Tiling Microarrays	Expression profiling by genome tiling array	Saccharomyces cerevisiae	8	BAR CEL	Gavin Sherlock	Dec 18, 2008
GSE11802	Annotating Low Abundance and Transient RNAs in Yeast using Tiling Microarrays and Ultra High-throughput Sequencing	Expression profiling by high throughput sequencing Expression profiling by genome tiling array	Saccharomyces cerevisiae	24	BAR CEL TXT	Gavin Sherlock	Dec 18, 2008
GSE12163	Nucleosome occupancy in wild type and histone H3(A111G) yeast	Genome binding/occupancy profiling by genome tiling array	Saccharomyces cerevisiae	8	BAR CEL GRD	Randall Heywood Morse	Jul 19, 2008
GSE12677	Unphosphorylated SR-like Protein Npl3 Stimulates RNA Polymerase II Elongation	Expression profiling by genome tiling array	Saccharomyces cerevisiae	8	BAR CEL TXT	Miriam E Bucheli	Sep 06, 2008
GSE13615	Distinct differences in chromatin structure at telomeric X- and Y-elements in budding yeast.	Genome binding/occupancy profiling by genome tiling array	Saccharomyces cerevisiae	2	BAR CEL CHP	Claes M Gustafsson	Jul 01, 2009
GSE16040	S. pombe genome-wide nucleosome mapping reveals positioning mechanisms distinct from S. cerevisiae	Genome binding/occupancy profiling by genome tiling array Expression profiling by array	Saccharomyces cerevisiae Schizosaccharomyces pombe	16	BAR CEL	Tobias Straub	Feb 01, 2010
GSE16258	A Top2 and Hmo1-mediated genome architectural pathway preventing chromosome fragility.	Genome binding/occupancy profiling by genome tiling array	Saccharomyces cerevisiae	22	BAR CEL TXT	Andrea Cocito	Sep 05, 2009
GSE16514	Genome-wide localization of Gcn5 under normal and stress conditions in S. cerevisiae and S. pombe	Genome binding/occupancy profiling by genome tiling array	Saccharomyces cerevisiae Saccharomyces cerevisiae/Schizosaccharomyces pombe fusant Schizosaccharomyces pombe	4	BAR CEL	Anthony Wright	Mar 01, 2010
GSE16556	Role of Gcn5 in KCl stress adaptation in S. cerevisiae and S. pombe: transcriptional and genomic analyses	Expression profiling by array Genome binding/occupancy profiling by genome tiling array	Saccharomyces cerevisiae Saccharomyces cerevisiae/Schizosaccharomyces pombe fusant Schizosaccharomyces pombe	22	BAR CEL	Anthony Wright	Mar 01, 2010
GSE16693	Interdependent roles for histone chaperones and a chromatin boundary regulator in histone gene repression	Genome binding/occupancy profiling by genome tiling array	Saccharomyces cerevisiae	5	BAR CEL	Harm van Bakel	Aug 14, 2009
GSE16742	Histone H3 N-terminus Regulates Higher Order Structure of Yeast Heterochromatin	Genome binding/occupancy profiling by genome tiling array	Saccharomyces cerevisiae	9	BAR CEL	Adam Samuel Sperling	Aug 01, 2009