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30 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter			Pseudomonas fluorescens
GSE228022	Differential expression of Pseudomonas fluorescens SBW25 during growth using glucose or MHPP as carbon sources	Expression profiling by high throughput sequencing	Pseudomonas fluorescens	8	CSV	Joshua Elmore	Mar 22, 2024
GSE245811	Role of quorum sensing of Hafnia alvei H4 in co-culture with Pseudomonas fluorescens ATCC13525 analyzed by biological and transcriptomic	Expression profiling by high throughput sequencing	Hafnia alvei Pseudomonas fluorescens	6	TXT	Yanan Wang	Jan 31, 2024
GSE228016	Evolutionary innovation through transcription factor rewiring in microbes is shaped by levels of transcription factor activity, expression, and existing connectivity	Expression profiling by high throughput sequencing	Pseudomonas fluorescens	15	CSV TXT	Matthew J Shepherd	Sep 27, 2023
GSE196705	YAMAT-seq of mature tRNA pools in the bacterium Pseudomonas fluorescens SBW25 and derivatives.	Non-coding RNA profiling by high throughput sequencing	Pseudomonas fluorescens	24	XLSX	Jenna Gallie	Dec 02, 2022
GSE190448	The ColR/S two-component system is a conserved determinant of host association across Pseudomonas species	Expression profiling by high throughput sequencing	Pseudomonas aeruginosa Pseudomonas fluorescens	24	TXT	Chrisitna L Wiesmann	Oct 12, 2022
GSE206989	Virulence, cellular masking, and grazing resistance in the struggle to survive under long term protozoan predation; the genetics of survival	Expression profiling by high throughput sequencing	Acanthamoeba sp. Pseudomonas fluorescens	24	TXT	Heather Hendrickson	Jun 30, 2022
GSE200822	Dynamic mode decomposition of transcriptome dynamics and optimal sensor placement for discovery of genetic reporters	Expression profiling by high throughput sequencing	Pseudomonas fluorescens	40	JSON TSV	Aqib Hasnain	Apr 21, 2022
GSE200723	Protozoan predation drives rapid adaptive divergence by selecting for tuned cellulose production and amyloid fibrils in Pseudomonas fluorescens SBW25	Expression profiling by high throughput sequencing	Acanthamoeba sp. Pseudomonas fluorescens	24	TXT	Heather Hendrickson	Apr 20, 2022
GSE181272	Next Generation Sequencing Facilitates Quantitative Analysis of Transcriptomes of Wild Type and invF Deficient Mutant of Pseudomonas fluorescens 2P24	Expression profiling by high throughput sequencing	Pseudomonas fluorescens	12	TXT SRA Run Selector	Jing Wang	Aug 03, 2021
GSE160152	Identifying candidate genes whose expression is regulated by CbrAB and NtrBC in Pseudomonas fluorescens SBW25	Expression profiling by high throughput sequencing	Pseudomonas fluorescens	2	CSV SRA Run Selector	Xue-Xian Zhang	Dec 12, 2020
GSE144791	YAMAT-seq of mature tRNA pools in the bacterium Pseudomonas fluorescens SBW25 and derivatives	Other	Pseudomonas fluorescens	27	XLSX SRA Run Selector	Jenna Gallie	Nov 02, 2020
GSE157075	Determination of carbon metabolism response regulators regulons in several Pseudomonas species by DAP-seq	Other	Pseudomonas fluorescens Pseudomonas putida Stutzerimonas stutzeri	96	WIG SRA Run Selector	Alexey Kazakov	Oct 01, 2020
GSE158273	Iron deficiency response of interactions between Brachypodium and Pseudomonas fluorescens SBW25 under controlled growth conditions.	Expression profiling by high throughput sequencing	Brachypodium distachyon Pseudomonas fluorescens	30	TXT SRA Run Selector	Rene M Boiteau	Sep 22, 2020
GSE146488	Identifying candidate genes whose expression is regulated by the HutC transcriptional repressor in Pseudomonas fluorescens SBW25	Expression profiling by high throughput sequencing	Pseudomonas fluorescens	2	CSV SRA Run Selector	Xue-Xian Zhang	Mar 06, 2020
GSE110489	Definition of global transcriptional variation in wild type Pseudomonas fluorescens Pf0-1 and its phosphorothioate modification (PT) deficient mutant by RNA-seq analysis	Expression profiling by high throughput sequencing	Pseudomonas fluorescens	2	XLS SRA Run Selector	Lianrong Wang	Feb 15, 2018
GSE64448	Glutaraldehyde resistance mechanisms in Pseudomonas fluorescens and Pseudomonas aeruginosa biofilms	Expression profiling by high throughput sequencing	Pseudomonas fluorescens	4	TXT SRA Run Selector	Amit Vikram	Apr 06, 2015
GSE55388	Pseudomonas fluorescens transcriptome in flowback water	Expression profiling by high throughput sequencing	Pseudomonas fluorescens	2	TXT SRA Run Selector	Kyle J Bibby	Dec 23, 2014
GSE55147	Dual transcriptomic analysis of the interaction between the ectomycorrhizal fungus Laccaria bicolor S238N and soil Pseudomonas fluorescens Pf29Arp	Expression profiling by array	Pseudomonas fluorescens Pseudomonas fluorescens Pf29Arp	6	GPR	Annegret Kohler	Oct 01, 2014
GSE39636	Modulation of primary cell function of host Pseudomonas bacteria by conjugative plasmid pCAR1	Expression profiling by genome tiling array	Pseudomonas Pseudomonas aeruginosa Pseudomonas aeruginosa PAO1 Pseudomonas fluorescens Pseudomonas fluorescens Pf0-1 Pseudomonas putida Pseudomonas putida KT2440	36	BAR CEL	Hideaki Nojiri	Dec 25, 2012
GSE33865	Expression analysis of the AdnA regulon in Pseudomonas fluorescens Pf0-1	Expression profiling by array	Pseudomonas fluorescens Pseudomonas fluorescens Pf0-1	4	TXT	Matthew Mastropaolo	Nov 30, 2011