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8946 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter			Mus musculus		TSV
GSE130082	NEIL1 and NEIL2 DNA glycosylases protect neural crest development against mitochondrial oxidative stress	Expression profiling by high throughput sequencing	Xenopus laevis Mus musculus	45	TSV	Emil Karaulanov	Sep 16, 2019
GSE132117	Histone H2B monoubiquitination regulates heart development via epigenetic control of cilia motility	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Xenopus laevis Mus musculus	33	TSV	Martina Brueckner	Jun 04, 2019
GSE150858	Barcoded viral tracing of single-cell interactions in CNS inflammation	Other Expression profiling by high throughput sequencing	unidentified plasmid Suid alphaherpesvirus 1 Mus musculus	128	CSV TAR TSV TXT ZIP	Michael Wheeler	Apr 22, 2021
GSE99978	Thiol-linked alkylation for the metabolic sequencing of RNA	Expression profiling by high throughput sequencing Other Non-coding RNA profiling by high throughput sequencing	synthetic construct Mus musculus	141	TSV TXT	Brian Reichholf	Sep 23, 2017
GSE109262	Joint profiling of chromatin accessibility, DNA methylation and transcription in single cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	synthetic construct Mus musculus	244	TSV TXT SRA Run Selector	Felix Krueger	Jan 17, 2018
GSE110283	Single cell RNA-Seq of adult mouse pancreatic stem cells and early progenitors	Expression profiling by high throughput sequencing	synthetic construct Mus musculus	856	TSV SRA Run Selector	Anthony Gavalas	Sep 10, 2019
GSE134311	scRCAT-seq: simultaneously profile RNA TSS and TES at single-cell level	Expression profiling by high throughput sequencing	synthetic construct Mus musculus Homo sapiens	116	BED CSV GTF MTX TSV TXT SRA Run Selector	Jiawei Zhong	Aug 24, 2020
GSE161676	Identifying non-genetic determinants of malignant clonal fitness at single cell resolution	Expression profiling by high throughput sequencing Other Methylation profiling by high throughput sequencing	synthetic construct Mus musculus	271	BED MTX SEG TSV VCF	Mark Dawson	Nov 08, 2021
GSE169706	Seq-Scope: Submicrometer-resolution spatial barcoding technology that enables microscopic examination of tissue transcriptome at single cell and subcellular levels	Other	synthetic construct Mus musculus	4	MTX TSV SRA Run Selector	Jun Hee Lee	Apr 19, 2021
GSE185666	Dual Chromatin Repressors Regulate Hippocampal Development	Expression profiling by high throughput sequencing Other	synthetic construct Mus musculus	2	MTX TSV SRA Run Selector	Kai-Chun Chang	Feb 01, 2022
GSE186064	Dgcr8 function in the anterior second heart field	Expression profiling by array Non-coding RNA profiling by array	synthetic construct Mus musculus	30	CEL TSV TXT	Silvia Elisa Racedo	Oct 01, 2023
GSE197501	Combinatorial quantification of 5mC and 5hmC at individual CpG dyads and the transcriptome in single cells reveals modulators of DNA methylation maintenance fidelity	Methylation profiling by high throughput sequencing Other	synthetic construct Mus musculus Homo sapiens	52	CSV MTX RDS TSV TXT XLSX	Alex Chialastri	Aug 07, 2023
GSE212159	De novo enhancer function in divergent hominin haplotypes	Expression profiling by high throughput sequencing Other	synthetic construct Mus musculus	3	MTX TSV TXT	Craig Barrett Lowe	Nov 23, 2022
GSE218470	Enhancer grammar of liver cell types and hepatocyte zonation states [FACS_MPRA]	Other	synthetic construct Mus musculus	32	TSV	Carmen Bravo Gonzalez-Blas	Sep 07, 2023
GSE218471	Enhancer grammar of liver cell types and hepatocyte zonation states [12K_MPRA]	Other	synthetic construct Mus musculus	20	TSV	Carmen Bravo Gonzalez-Blas	Sep 07, 2023
GSE218472	Enhancer grammar of liver cell types and hepatocyte zonation states	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	synthetic construct Mus musculus Homo sapiens	79	BW TSV	Carmen Bravo Gonzalez-Blas	Sep 07, 2023
GSE220884	Autophagy controls mucus secretion from intestinal goblet cells by alleviating ER stress super	Expression profiling by high throughput sequencing Other	synthetic construct mouse gut metagenome Mus musculus	26	TSV XLSX	Shai Bel	Feb 03, 2023
GSE220949	Reconstructing regulative progenitor behaviors in synthetic embryos	Expression profiling by high throughput sequencing Other	synthetic construct Mus musculus	29	TAR TSV TXT	Helene Kretzmer	Mar 05, 2024
GSE223892	Poly-Adenylation Lengthening of Short RNAs for Simultaneous Short and Long Nanopore Sequencing (PALS-NS)	Other Non-coding RNA profiling by high throughput sequencing	synthetic construct Mus musculus	19	TSV	Christos Argyropoulos	Dec 31, 2024
GSE230090	Transcriptional activity of an MPRA library containing sequences of genomic origin bound by the transcription factor CRX measured in retinas from mice carrying pathogenic CRX variants	Other	synthetic construct Mus musculus	38	TSV	Michael Aaron White	May 27, 2023