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12 series

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Accession	Title	Series type(s)	Organism(s)	Samples	GDS	Supplementary	Contact	Release date
Filter			Mus musculus				Hendrik Marks
GSE53387	Mammalian embryo comparison identifies novel pluripotency genes associated with the naïve or primed state	Expression profiling by high throughput sequencing	Bos taurus Mus musculus Sus scrofa	34		BEDGRAPH WIG SRA Run Selector	Hendrik Marks	Aug 14, 2018
GSE23943	Epigenome and transcriptome of naive pluripotent mouse embryonic stem (ES) cells cultured in 2i serum-free medium	Genome binding/occupancy profiling by high throughput sequencing Other Expression profiling by high throughput sequencing	Mus musculus	41		BED WIG SRA Run Selector	Hendrik Marks	Apr 27, 2012
GSE31777	An efficient method for generation of bi-allelic null mutant mouse embryonic stem cell lines and its application for investigating epigenetic modifiers	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	8		BED WIG SRA Run Selector	Hendrik Marks	Sep 02, 2017
GSE41923	Whole-genome bisulfite sequencing of two distinct interconvertible DNA methylomes of mouse embryonic stem cells	Methylation profiling by high throughput sequencing	Mus musculus	14		BEDGRAPH SRA Run Selector	Hendrik Marks	Jul 12, 2013
GSE47793	The DNA methylome of Epiblast Stem Cells and Embryonic Stem Cells is distinct and not fully reversible	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	6		BED WIG SRA Run Selector	Hendrik Marks	Apr 28, 2014
GSE52071	Mll2 is required for H3K4 trimethylation on bivalent promoters in ES cells whereas Mll1 is redundant	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	30		BED WIG SRA Run Selector	Hendrik Marks	Jan 20, 2014
GSE60738	Dynamics of gene silencing during X inactivation using allele-specific RNA-Seq	Expression profiling by high throughput sequencing Other	Mus musculus	20		BED TXT WIG SRA Run Selector	Hendrik Marks	Jun 15, 2015
GSE101292	Allele-specific expression profiling of imprinted genes in mouse isogenic pluripotent tissues and cell lines	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	22		WIG SRA Run Selector	Hendrik Marks	Feb 16, 2019
GSE101675	Integrative Proteomic Profiling Reveals PRC2-Dependent Epigenetic Crosstalk Maintains Ground-State Pluripotency.	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	19		BED BW SRA Run Selector	Hendrik Marks	Nov 24, 2018
GSE112234	In vitro capture and characterization of embryonic rosette-stage pluripotency between naive and primed states	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	4		BED BW SRA Run Selector	Hendrik Marks	Apr 28, 2020
GSE120673	A plug and play microfluidic platform for standardized sensitive low-input Chromatin Immunoprecipitation	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	51		BW WIG SRA Run Selector	Hendrik Marks	Feb 10, 2021
GSE124476	Super-enhancer subregions highly bound by the nuclear receptor ESRRB regulate the exit from naïve pluripotency	Methylation profiling by high throughput sequencing	Mus musculus	1		BED SRA Run Selector	Hendrik Marks	Jan 19, 2020