GEO Browser - GEO

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572 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL24247		Mus musculus		TAR
GSE155677	Multimodal profiling of the transcriptional regulatory landscape of the developing mouse cortex identifies Neurog2 as a key epigenome remodeler	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Escherichia coli Mus musculus	36	BED BEDGRAPH BW FA MTX PICKLE TAR TSV TXT SRA Run Selector	Boyan Bonev	Jan 27, 2022
GSE159468	Hijacking of transcriptional condensates by endogenous retroviruses	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	78	BED BW HIC TAR TSV SRA Run Selector	Sara Hetzel	Mar 30, 2022
GSE160764	Epigenetic signals that direct cell type specific interferon beta response in mouse cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	221	BED MTX TAR TSV TXT SRA Run Selector	Markus Muckenhuber	Dec 31, 2022
GSE161570	KMT2C Loss Promotes Small Cell Lung Cancer Metastasis through DNMT3A-mediated Epigenetic Reprogramming	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Mus musculus	55	BED BW CGMAP CSV GAPPEDPEAK TAR XLSX SRA Run Selector	Xaingyu Pan	Feb 23, 2022
GSE167552	The stress response regulator HSF1 modulates natural killer cell anti-tumour immunity	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	21	BED BW TAR TSV	Kathryn Grace Hockemeyer	Feb 26, 2021
GSE174554	A single cell atlas of human glioma under therapy	Expression profiling by high throughput sequencing Other	Homo sapiens Mus musculus	113	BED MTX TAR TSV TXT ZIP	Aaron Diaz	Jul 05, 2022
GSE198423	CD8+ T cell responsiveness to anti-PD-1 is epigenetically regulated by Suv39h1 in melanomas	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	21	BED TAR	Paul Gueguen	Mar 14, 2022
GSE218274	PAX3-FOXO1 expression in endothelial progenitors dictates myogenic reprogramming and rhabdomyosarcoma identity	Genome binding/occupancy profiling by high throughput sequencing Other Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	75	BED BW HIC TAR TDF TXT	Hongjian Jin	Sep 29, 2023
GSE224894	Polycomb Repressive Complex 2 regulates basal cell fate during adult olfactory neurogenesis	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	13	BED BIGWIG BW TAR	Bradley Goldstein	Sep 18, 2023
GSE231869	Modulation of CTCF barrier permeability by ZFP661 enhances protocadherin diversity for proper cortical dendritic projection in mammals	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	102	BED BW NARROWPEAK TAR TXT	Jinpu Jin	May 09, 2023
GSE241504	WWP2 MEDIATES THE METABOLIC REPROGRAMMING OF RENAL MYOFIBROBLASTS TO PROMOTE KIDNEY FIBROSIS	Expression profiling by high throughput sequencing	Mus musculus	25	BED TAR	Jing Guo	Feb 05, 2024
GSE266876	Single-cell m6A profiling in the mouse brain uncovers cell type-specific RNA methylomes and age-dependent differential methylation	Expression profiling by high throughput sequencing	Mus musculus	4	BED TAR	Matthew Tegowski	Sep 24, 2024
GSE285187	A core stemness program in exhausted CD8+ T cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	24	BED BW TAR TBI TSV	Min Peng	Apr 23, 2025
GSE290258	Satb1 directs the differentiation of TH17 cells through suppression of IL-2 expression [scMultiom ATAC/RNA-seq]	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	12	BED TAR TBI	Joachim Schultze	May 20, 2025
GSE189287	Liver ILC2s suppress gluconeogenesis and limit blood glucose elevation through IL-13 signaling	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	30	BEDGRAPH TAR	Masanori Fujimoto	Jul 27, 2022
GSE201751	Global transcriptional, ATAC-sequencing, and methylation analyses of mouse totipotent potential stem cells and extended pluripotent stem cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	37	BEDGRAPH TAR TXT	Yiming Sun	May 04, 2022
GSE209965	Decitabine-induced T cell remodeling facilitates a high antitumor response to PD-1 blockade therapy by promoting the expansion and effector function of CD8+ progenitor exhausted T cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	24	BEDGRAPH TAR	Jing Nie	Jul 28, 2022
GSE270915	The expression order determines the pioneer functions of Ngn3 and NeuroD1 in pancreatic endocrine differentiation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	3745	BEDGRAPH CSV MTX TAR TBI TSV	Cheng-ran Xu	Feb 15, 2025
GSE169044	Transcription factor antagonism regulates heterogeneity in embryonic stem cell states	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	101	BIGWIG TAR XLSX SRA Run Selector	Sofia Hu	Nov 21, 2022
GSE199357	Autoreactive CD8+ T cells are restrained by an exhaustion-like program that is maintained by LAG3	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	23	BIGWIG TAR TXT	Anthony Richard Cillo	Apr 08, 2022