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876 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL24247		Mus musculus		BED
GSE200673	Hmga2 protein loss alters nuclear envelope and affects 3D chromatin structure upon the induction of pluripotent stem cell commitment	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Other	Mus musculus	24	BED BW HIC	Pietro Zoppoli	Jul 08, 2022
GSE227614	ChIP-seq of pro-B cells to test the role of phase separation in EBF1 pioneering function	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	5	BED BW	Nikolay Zolotarev	Jan 18, 2024
GSE227617	The role of phase separation in EBF1 pioneering function	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	16	BED BW NARROWPEAK	Nikolay Zolotarev	Jan 18, 2024
GSE189563	Mitotic bookmarking by SWI/SNF subunits	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	460	BED BW NARROWPEAK TXT	Zhexin Zhu	Mar 18, 2023
GSE216655	The study of SWI/SNF subunits and other transcription factors deposition in asynchronous and mitotic mESCs and cells released from mitosis II	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	8	BED BW	Zhexin Zhu	Mar 19, 2023
GSE233176	Nuclear translocation of PTH receptor hijacks thyroid hormone signaling for bone mass regulation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	11	BED XLS	Jian xi Zhu	Dec 20, 2023
GSE132446	Refined spatial temporal epigenomic profiling reveals intrinsic connection between PRDM9-mediated H3K4me3 and the fate of double-stranded breaks	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	186	BED BIGWIG SRA Run Selector	Yuxuan Zheng	Feb 12, 2020
GSE172250	A mouse model for assessing mTOR kinase-independent role and off-target effect of mTOR kinase inhibitors	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	41	BED FPKM_TRACKING TSV	Yi Zheng	Aug 29, 2023
GSE224667	Genome-wide maps of chromatin accessibility changes in bone marrow derived macrophages (BMDMs) isolated from Baf60a KO or WT mice	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	12	BED NARROWPEAK	Yang Zhao	Sep 29, 2023
GSE224668	Myeloid BAF60a Deficiency Alters Metabolic Homeostasis and Exacerbates Atherosclerosis	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	37	BED NARROWPEAK	Yang Zhao	Sep 29, 2023
GSE248035	Genetic variation in IL-4 activated tissue resident macrophages alters the epigenetic state to determine strain specific synergistic responses to LPS [scATAC-seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	2	BED CSV TSV	Mingming Zhao	Dec 29, 2023
GSE248038	Genetic variation in IL-4 activated tissue resident macrophages alters the epigenetic state to determine strain specific synergistic responses to LPS	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	71	BED BW CSV H5 HIC TSV	Mingming Zhao	Dec 29, 2023
GSE243513	Rational cell fate engineering through chromatin dynamics [ATAC-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	20	BED BW	Chengchen Zhao	Jun 24, 2024
GSE243514	Rational cell fate engineering through chromatin dynamics [CUT&TAG]	Other	Mus musculus	8	BED BW	Chengchen Zhao	Jun 24, 2024
GSE243517	Rational cell fate engineering through chromatin dynamics	Genome binding/occupancy profiling by high throughput sequencing Other Expression profiling by high throughput sequencing	Mus musculus	95	BED BW	Chengchen Zhao	Jun 24, 2024
GSE263597	Rational cell fate engineering through chromatin dynamics [CUT&TAG II]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	8	BED BW	Chengchen Zhao	Jun 24, 2024
GSE203272	Mcm2 promotes stem cell differentiation via its ability to bind H3-H4	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	46	BED BW	zhiguo zhang	Nov 16, 2022
GSE265978	Sequence and parent-of-origin dependent m6A contribute to allele-specific gene expression [GLORI]	Other	Mus musculus	2	BED	Ying Zhang	Apr 26, 2024
GSE265979	Sequence and parent-of-origin dependent m6A contribute to allele-specific gene expression	Other	Mus musculus	30	BED	Ying Zhang	Apr 26, 2024
GSE182554	HDAC1/2 is indispensable for mouse and bovine ZGA via regulating distribution of H3K27ac and H3K4me3 [ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	16	BED BW SRA Run Selector	Kun Zhang	May 21, 2022