GEO Browser - GEO

Series

Samples

Platforms

DataSets

301 series

Export

Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL19057		Mus musculus		BEDGRAPH
GSE111121	Profiling of pluripotency factors in single cells and early embryos	Other	Mus musculus	361	BEDGRAPH SRA Run Selector	Sarah J Hainer	Jul 20, 2018
GSE98119	The energetics and physiological impact of cohesin extrusion	Other Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	352	BED BEDGRAPH BW HIC NARROWPEAK TXT SRA Run Selector	Seolkyoung Jung	May 01, 2018
GSE83833	Genome-wide characterization of histone mark co-occurrence at single molecule resolution	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	310	BEDGRAPH BIGWIG SRA Run Selector	Ido Amit	Jul 13, 2016
GSE140611	Dichotomous Engagement of HDAC3 Activity Governs Inflammatory Responses	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	273	BEDGRAPH BIGWIG TDF	Hoang Nguyen	Apr 30, 2020
GSE92412	Epigenetic modulation of a hardwired 3D chromatin landscape in two naive states of pluripotency.	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	194	BEDGRAPH BIGWIG BW	Hendrik G Stunnenberg	Apr 30, 2019
GSE98140	SET1A/COMPASS and shadow enhancers in the regulation of homeotic gene expression	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	193	BEDGRAPH BW SRA Run Selector	Ali Shilatifard	May 09, 2017
GSE203653	RNA stability controlled by m6A methylation provides X to autosome compensation in mammals	Expression profiling by high throughput sequencing Other	Homo sapiens Mus musculus	171	BEDGRAPH BW CSV TSV	Julian Konig	Feb 14, 2023
GSE205783	Sequential and directional insulation by conserved CTCF sites underlies the Hox timer in stembryos	Other Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	170	BEDGRAPH BIGWIG COOL NARROWPEAK TXT	Lucille Lopez-Delisle	Apr 28, 2023
GSE130119	MAFG-driven astrocytes promote CNS inflammation	Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	163	BEDGRAPH CSV TXT	Michael Wheeler	Feb 12, 2020
GSE184036	Single-cell profiling of histone modifications and transcription in developmental systems with EpiDamID	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Danio rerio Homo sapiens Mus musculus	155	BEDGRAPH BROADPEAK HDF5 NARROWPEAK TSV	Jop Kind	Apr 01, 2022
GSE80154	Enhancer invasion shapes MYCN dependent transcriptional amplification in neuroblastoma	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing Other Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	144	BEDGRAPH CEL WIG	James Bradner	Jan 29, 2018
GSE151910	Loop Extrusion Mediates Physiological Locus Contraction for V(D)J Recombination	Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	138	BEDGRAPH BW TXT XLS	Frederick W Alt	Nov 07, 2020
GSE157139	CRISPR and biochemical screens identify MAZ as a co-factor in CTCF-mediated insulation at Hox clusters	Expression profiling by high throughput sequencing Other Genome binding/occupancy profiling by high throughput sequencing	Mus musculus synthetic construct	138	BEDGRAPH BW HIC NARROWPEAK TXT	Danny Reinberg	Feb 06, 2022
GSE184490	Dynamic Runx1 chromatin boundaries affect gene expression in hematopoietic development	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Mus musculus	132	BED BEDGRAPH TXT SRA Run Selector	Dominic Owens	Dec 16, 2021
GSE220529	Accelerated DNA replication fork speed due to Loss of R-Loops in Myelodysplastic Syndromes with SF3B1 Mutation	Other Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	131	BEDGRAPH	David Rombaut	Feb 22, 2024
GSE237400	The establishment of a DNA replication timing program in the early embryo.	Other	Mus musculus	127	BED BEDGRAPH	Jason A Halliwell	May 23, 2024
GSE155089	Enhancer-associated H3K4 methylation safeguards in vitro germline competence	Other Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	118	BEDGRAPH BIGWIG COV	Alvaro Rada-Iglesias	Jul 27, 2020
GSE155658	Postnatal development of Cardiomyocyte	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus Rattus rattus	115	BEDGRAPH TXT XLSX SRA Run Selector	Li Wang	May 29, 2022
GSE158673	EBF1 and Pax5 safeguard leukemic transformation by limiting IL-7 signaling, Myc expression and folate metabolism	Expression profiling by array Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	110	BEDGRAPH CSV TXT	Senthilkumar Ramamoorthy	Oct 19, 2020
GSE94431	Capturing the onset of PRC2-mediated repressive domain formation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	107	BEDGRAPH BW	Danny Reinberg	Jun 21, 2018