GEO Browser - GEO

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20 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter					WIG	Jorja Henikoff
GSE28298	Tripartite organization of centromeric chromatin in budding yeast	Genome binding/occupancy profiling by high throughput sequencing	Saccharomyces cerevisiae	28	BAM PDF SAM WIG	Jorja Henikoff	Dec 07, 2011
GSE31602	Tissue-specific nuclei purification from animal models for genome-wide expression and chromatin profiling.	Expression profiling by genome tiling array Genome binding/occupancy profiling by high throughput sequencing	Caenorhabditis elegans	18	BAM BEDGRAPH GFF PAIR PDF TXT WIG SRA Run Selector	Jorja Henikoff	Dec 05, 2011
GSE44412	Holocentromeres are dispersed point centromeres localized at transcription factor hotspots	Genome binding/occupancy profiling by high throughput sequencing	Caenorhabditis elegans	19	BAM BED BEDGRAPH PDF WIG SRA Run Selector	Jorja Henikoff	Apr 08, 2014
GSE44200	Mot1 redistributes TBP from TATA-containing to TATA-less promoters	Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster Saccharomyces cerevisiae	20	BED BEDGRAPH WIG SRA Run Selector	Jorja Henikoff	Oct 21, 2013
GSE47795	RNA Polymerase-II-generated DNA supercoils destabilize nucleosomes	Genome binding/occupancy profiling by high throughput sequencing Other	Drosophila melanogaster	25	BED RTF TXT WIG SRA Run Selector	Jorja Henikoff	Oct 31, 2013
GSE49106	Nucleosomes are context-specific, H2A.Z modulated barriers to RNA polymerase	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Drosophila melanogaster	12	BED WIG XML SRA Run Selector	Jorja Henikoff	Mar 06, 2014
GSE51949	The budding yeast Centromere DNA Element II wraps a stable Cse4 hemisome in either orientation in vivo	Genome binding/occupancy profiling by high throughput sequencing	Saccharomyces cerevisiae	17	BED TXT WIG SRA Run Selector	Jorja Henikoff	Apr 15, 2014
GSE52349	The nucleosomal barrier to promoter escape by RNA Polymerase II is overcome by the chromatin remodeler Chd1	Genome binding/occupancy profiling by genome tiling array Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	14	BED BEDGRAPH GFF PAIR WIG	Jorja Henikoff	Apr 15, 2014
GSE64294	A high-resolution map of inner kinetochore proteins in fission yeast regional centromeres	Genome binding/occupancy profiling by high throughput sequencing	Schizosaccharomyces pombe	41	BED WIG SRA Run Selector	Jorja Henikoff	Aug 17, 2015
GSE67453	ChEC-seq kinetics discriminates transcription factor binding sites by DNA sequence and shape in vivo	Genome binding/occupancy profiling by high throughput sequencing	Saccharomyces cerevisiae	57	BED BEDGRAPH RTF WIG SRA Run Selector	Jorja Henikoff	Oct 22, 2015
GSE67454	A simple method for generating high-resolution maps of genome wide protein binding	Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster Homo sapiens Mus musculus	5	BED WIG SRA Run Selector	Jorja Henikoff	Jun 12, 2015
GSE76120	Transcriptional regulators compete with nucleosomes post-replication	Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster	24	BED WIG SRA Run Selector	Jorja Henikoff	Apr 07, 2016
GSE81289	Mediator binding to UASs is broadly uncoupled from transcription and cooperative with TFIID recruitment to promoters	Genome binding/occupancy profiling by high throughput sequencing	Saccharomyces cerevisiae	76	BED RTF WIG SRA Run Selector	Jorja Henikoff	Oct 20, 2016
GSE21615	Genomic maps of homotypic H2Av, heterotypic H2Av, input and 80mM salt soluble chromatin from Drosophila S2 cells	Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster	9	BEDGRAPH RTF TXT WIG SRA Run Selector	Jorja Henikoff	Nov 01, 2010
GSE43753	Doxorubicin enhances nucleosome turnover around promoters	Genome binding/occupancy profiling by genome tiling array Expression profiling by genome tiling array	Mus musculus	34	CALLS GFF PAIR WIG	Jorja Henikoff	Apr 19, 2013
GSE52347	The nucleosomal barrier to promoter escape by RNA Polymerase II is overcome by the chromatin remodeler Chd1 [NimbleGen]	Genome binding/occupancy profiling by genome tiling array	Mus musculus	4	GFF PAIR WIG	Jorja Henikoff	Apr 15, 2014
GSE30551	Epigenome characterization at single base-pair resolution	Genome binding/occupancy profiling by high throughput sequencing	Saccharomyces cerevisiae	7	WIG SRA Run Selector	Jorja Henikoff	Oct 27, 2011
GSE39331	Dynamics of yeast ISWI and CHD chromatin remodeler genomic association	Genome variation profiling by high throughput sequencing	Saccharomyces cerevisiae	18	WIG	Jorja Henikoff	Feb 28, 2013
GSE39430	Dynamics of yeast ISWI and CHD chromatin remodeler genomic association (part 1)	Genome binding/occupancy profiling by high throughput sequencing	Saccharomyces cerevisiae	7	WIG SRA Run Selector	Jorja Henikoff	Mar 01, 2013
GSE39431	Dynamics of yeast ISWI and CHD chromatin remodeler genomic association (part 2)	Genome binding/occupancy profiling by high throughput sequencing	Saccharomyces cerevisiae	11	WIG SRA Run Selector	Jorja Henikoff	Mar 01, 2013