Batch-normalization of cerebellar and medulloblastoma gene expression datasets utilizing empirically defined negative control genes

Treehouse compendium of RNA-Seq gene expression data from tumors

Integrative analysis of competing endogenous RNA networks reveals the functional lncRNAs in Alzheimer’s diseased

Revealing the Key Regulators of Cell Identity in the Human Adult Pancreas [scRNA-seq]

MOCCASIN: A method for correcting for known and unknown confounders in RNA splicing analysis

A pooled treatment-curated breast cancer gene-expression dataset

Treehouse compendium of polyA selected RNA-Seq gene expression data from 33 PDX

Treehouse compendium of polyA selected RNA-Seq gene expression data from 932 cell lines

Treehouse compendium of polyA selected RNA-Seq gene expression data from 12,747 tumors

Treehouse compendium of ribosomal-depletion RNA-Seq gene expression data from 43 PDX

Treehouse compendium of ribosomal-depletion RNA-Seq gene expression data from 296 tumors

Compact transcription factor cassettes generate functional, engraftable motor neurons by direct conversion [re-analysis]

Genome-wide binding map of the HIV Tat protein to the human genome (ChIP-chip)

Integration of genome-wide approaches identifies lncRNAs of adult neural stem cells and their progeny in vivo [RNA CaptureSeq]

Kc167 ORC Localization in hydroxyurea (HU)

Identification and characterization of MCF01A circular RNAs [ChIP-seq]

Genome-wide RNA sequencing of B6 mouse islets

small RNA-seq from urinary bladder (ENCSR000AFP)

small RNA-seq from liver (ENCSR000AFV)

single cell RNA-seq from GM12878 (ENCSR000AIY)